DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and abcc3

DIOPT Version :10

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001107301.1 Gene:abcc3 / 100135090 XenbaseID:XB-GENE-1003737 Length:1531 Species:Xenopus tropicalis


Alignment Length:1422 Identity:482/1422 - (33%)
Similarity:728/1422 - (51%) Gaps:222/1422 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWE----------- 67
            |.:.|.|.|:.:|||...:...|.:.||.|::|:...:...|..|.....:.||           
 Frog   208 PESDAGFLSRLTFWWFTKMAILGYKRPLEDKDLWSLNEDDTSNVVVTNLIKEWEKEKSNLAQMQV 272

  Fly    68 -------------------------DELKRSNPSVVRMILRAYGKIFVPMGLAFSISETICKSLM 107
                                     |..|...||.::::||.:|..|: :|..|.:.:.:...:.
 Frog   273 SYSKKPEAVLNHTDEKAYESDVLIVDNKKPKEPSFLKVLLRTFGPYFL-IGSFFKLFQDLLSFVN 336

  Fly   108 PLFLGGLVGYFATNQTDISENTAYLYAMGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYR 172
            |..|..|:.:.  ...|......:..|:.:.:..||..:..|....|.|..|.:||.|::|:|||
 Frog   337 PQLLSILITFI--KNKDAPSWWGFCIAVLMFLTSLVQTLILHQHFQYCFVTGMRLRSAITGIIYR 399

  Fly   173 KVLQVSKSSSNDGLRGRAINILSNDLGRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGV 237
            |.|.::.|:......|..:|::|.|..||.....||:..|..|::..|..:.:::.:|.|.:.||
 Frog   400 KSLVITNSAKRSSTVGEVVNLMSVDAQRFQDLTTFLNMLWSAPLQICLALYFLWQALGPSVLAGV 464

  Fly   238 SFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKE 302
            :.|:..||:.|:.|.|...::....:..|.|:||||||:.||:|:|:||||.|||:.:.|:|.||
 Frog   465 AVMVLLIPINAFIAMKTRAFQVEQMQYKDSRIKLMNEILNGIKVLKLYAWEPSFAQKVLEIRNKE 529

  Fly   303 VKAIRGTAYIHAALGCTSMISPLSVFL-ALCSYVYLGDP--LTAQKVYTVSSYFNMLNDSMVTFW 364
            :..::..||::|........:|..|.| ....||.:.:.  |.|:|.:...|.||:|...: ...
 Frog   530 LNILKKAAYLNALSTFAWTSAPFLVALTTFAVYVTVDEKNILDAEKAFVSLSLFNILRFPL-NML 593

  Fly   365 PMSITFIAEALVSAKRCKDFLLDGDKAEVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNG 429
            |..|:.:|:|.||.||.::||.:.:       |:.|..|         |||    .|.|:.::  
 Frog   594 PQVISNLAQASVSIKRIQNFLANDE-------LDLNAVT---------KDK----TLPGNAIT-- 636

  Fly   430 QVHHNRLRDYDPEATKKCVVLKNVSASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSF 494
             ||                   |.:.||..:.|   ..:::.:..:...:|.||||.||.||||.
 Frog   637 -VH-------------------NGTFSWAKNGG---AILQNINLLVPSGSLVAVVGQVGCGKSSL 678

  Fly   495 LNVLLGEVGIDKGEAMVHGKISYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMEL 559
            ::.||||:..::||..|.|.::|..|::|:...|::|||:|....||:.||||::.|.|..|:|:
 Frog   679 VSALLGEMEKEEGEVSVRGSVAYVPQQAWIQNCTLKDNILFGRAANEKNYKKVLEACALVTDLEV 743

  Fly   560 LPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCI--RDFL 622
            ||.||.|.:||:|::||||||.||||||||:..||:|||||||||||.||.|||||..|  ...|
 Frog   744 LPGGDQTEIGEKGINLSGGQKQRVSLARAVFSNADVYLLDDPLSAVDAHVAKHIFDNVIGPDGLL 808

  Fly   623 SNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQELQRS--------RQFQFLEQTQHDESGI 679
            ..|.|:||||.:.:|..|:|::::..|::...||||||.:.        |.:.|.::.:.::..|
 Frog   809 RGKTRVLVTHGISFLPQVDHIVVLVDGRVTEMGSYQELLKQNGAFSEFLRNYAFDDEVEEEDITI 873

  Fly   680 D--------THSVSSYLSRSDSEKSMEHQHNQLLR------------------------PDEHV- 711
            .        ..::|::...:|:|........:.:|                        |.|:: 
 Frog   874 PDEEEVLLAEETLSTHTDLADNEPVANEARKKFIRQISILSDGEPSHAMSTRRRFTEKKPSENLV 938

  Fly   712 ------EDVNQEQQT-VGSIKMHVYASYIKALDSTFLLGIVISLFV-----CARIMLTGVDYFLS 764
                  |.:.|.:.| .|.:||.|:..|:||      :|:.||:|:     |......|.:.:||
 Frog   939 AKQPPTEKLIQTETTETGRVKMTVFWQYMKA------VGLAISVFICFLYSCQNAAAIGANVWLS 997

  Fly   765 RWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVL----FYAT 825
            .|.          ...::|:|.   .|..:.:..   |.|        .||.|.|::    |...
 Frog   998 DWT----------NEPVINQTQ---QNTQMRVGV---YAA--------LGILQGLLVMTSSFSLA 1038

  Fly   826 ILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTD 890
            |.|                 :..:..||..|..........|::|...|||:|||||||..:|..
 Frog  1039 IAG-----------------IGAARKLHSALLDNKMHTPQSFYDTTPIGRIINRFSKDIYVIDEV 1086

  Fly   891 LPHTLLDCLA-FIIDVSGVVIIVAIANYW--LLIPAAIIGVILGMIRYLYVNTSRSVKRLESISR 952
            :|.|:|..|| |...:|.:::|||....:  ::||.||..:   .::..||.|||.:|||||:||
 Frog  1087 IPGTILMFLATFFTSLSTMIVIVASTPLFAVVIIPLAIAYI---FVQRFYVATSRQLKRLESVSR 1148

  Fly   953 SPVFSLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVL------C 1011
            ||::|..::|..|.:.|||...|::.........:.|..:::..:...|    |..|.      |
 Frog  1149 SPIYSHFSETITGASIIRAYGRQNSFIVLSDNKVDENQKSYYPGIVSNR----WLGVRVEFVGNC 1209

  Fly  1012 IVYMTAVTFSFLLL-KDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQP 1075
            :|...|:   |.:| ::....|.|||::.::..:|....|.:|.|::||..:.:||||.||.|..
 Frog  1210 VVLFAAL---FAVLGREHLSPGLVGLSVSYALQVTMSLNWMVRMTSDLETNIVAVERVKEYAENE 1271

  Fly  1076 SEALLETP---EKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAG 1137
            :||    |   |..||..:|||||.:|..|:.:||......|||:||..:...||:|||||||||
 Frog  1272 TEA----PWHIEDTKPPEDWPSKGEVELSNYSVRYRAGLDLVLKNLNLKVNGGEKVGIVGRTGAG 1332

  Fly  1138 KSSIIQSIFR-LACNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDE 1201
            |||:...:|| |...||:::||:|:|..|||.||||:::||||||||||||||.||||.::.||:
 Frog  1333 KSSMTLCLFRILEPAEGIVKIDNVNISEIGLQDLRSRLTIIPQDPVLFSGTLRMNLDPFNKYSDD 1397

  Fly  1202 EMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDP 1266
            |:||||....|:.:|:.....|.....:||.|.|||||||||||||:||..:|||:|||||.:|.
 Frog  1398 EIWKALELSNLKKFVAGQPSQLEYECSEGGENLSVGQRQLVCLARALLRKTRILILDEATAAIDL 1462

  Fly  1267 ETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTG 1323
            |||.|||.|||::|..||||||||||:|:||..||||:|.|.:.|...|..|:...|
 Frog  1463 ETDDLIQMTIRTQFEDCTVLTIAHRLNTIMDYTRVLVLDKGRIAEFDTPTNLIALKG 1519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 MRP_assoc_pro 14..1323 CDD:188098 481/1420 (34%)
abcc3NP_001107301.1 MRP_assoc_pro 7..1530 CDD:188098 482/1422 (34%)

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