| Sequence 1: | NP_001263057.1 | Gene: | Rpn2 / 43449 | FlyBaseID: | FBgn0028692 | Length: | 1029 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_114184.2 | Gene: | Psmd1 / 83806 | RGDID: | 621669 | Length: | 953 | Species: | Rattus norvegicus |
| Alignment Length: | 1023 | Identity: | 641/1023 - (62%) |
|---|---|---|---|
| Similarity: | 790/1023 - (77%) | Gaps: | 76/1023 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKLAGMVASK 67
Fly 68 VFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENPK-EASVVDERLE 131
Fly 132 GIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNE 196
Fly 197 VLRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSSVETNNLMAYQIAFDLYESATQ 261
Fly 262 EFLGNVLQHLKNT-APIPTALPSTFKPQGTTSEDGAKSEGDKSKSDEDITEETPADDKVERTIDS 325
Fly 326 LNEVEKLHQKNIEKLISILSGEVSIDLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVIANAF 390
Fly 391 MHSGTTSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSSGYSEG 455
Fly 456 GALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDD 520
Fly 521 AVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSL 585
Fly 586 SSDKDPVLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCPS 650
Fly 651 VVSLLAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQHT 715
Fly 716 DQSCPKSTFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLSLQSRTGHTNLQAVVGML 780
Fly 781 AFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVA 845
Fly 846 TAVLSIAARQKRRE-NADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEKKK 909
Fly 910 EEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSYEPLKDVT 974
Fly 975 IGGIIVFQHTGKAED-QELVEPVAAFGP-MNDEEKEPEPPEPFEYIED 1020 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rpn2 | NP_001263057.1 | RPN2 | 1..1003 | CDD:227446 | 627/1004 (62%) |
| PC_rep | 456..489 | CDD:280095 | 24/32 (75%) | ||
| PC_rep | 526..559 | CDD:280095 | 28/32 (88%) | ||
| HEAT repeat | 581..602 | CDD:293787 | 15/20 (75%) | ||
| HEAT repeat | 616..639 | CDD:293787 | 18/22 (82%) | ||
| HEAT repeat | 651..676 | CDD:293787 | 21/24 (88%) | ||
| PC_rep | 666..701 | CDD:280095 | 25/34 (74%) | ||
| Psmd1 | NP_114184.2 | RPN2 | 2..934 | CDD:227446 | 626/1002 (62%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 277..319 | 14/54 (26%) | |||
| PC 1 | 403..436 | 22/32 (69%) | |||
| PC 2 | 441..474 | 24/32 (75%) | |||
| PC 3 | 476..510 | 26/33 (79%) | |||
| PC 4 | 511..545 | 29/33 (88%) | |||
| PC 5 | 547..580 | 21/32 (66%) | |||
| HEAT repeat | 565..590 | CDD:293787 | 17/24 (71%) | ||
| PC 6 | 581..616 | 29/34 (85%) | |||
| HEAT repeat | 601..624 | CDD:293787 | 18/22 (82%) | ||
| PC 7 | 617..649 | 26/31 (84%) | |||
| HEAT repeat | 636..661 | CDD:293787 | 21/24 (88%) | ||
| PC 8 | 651..685 | 25/34 (74%) | |||
| HEAT repeat | 667..697 | CDD:293787 | 23/30 (77%) | ||
| PC 9 | 686..726 | 25/39 (64%) | |||
| PC 10 | 729..761 | 23/31 (74%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 839..881 | 24/93 (26%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 930..953 | 16/22 (73%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166352966 | |
| Domainoid | 1 | 1.000 | 153 | 1.000 | Domainoid score | I4196 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5116 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H2100 | |
| Inparanoid | 1 | 1.050 | 1207 | 1.000 | Inparanoid score | I175 |
| OMA | 1 | 1.010 | - | - | QHG53911 | |
| OrthoDB | 1 | 1.010 | - | - | D235012at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004235 | |
| OrthoInspector | 1 | 1.000 | - | - | oto95508 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101410 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10943 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2978 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.770 | |||||