DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn2 and rpn2

DIOPT Version :9

Sequence 1:NP_001263057.1 Gene:Rpn2 / 43449 FlyBaseID:FBgn0028692 Length:1029 Species:Drosophila melanogaster
Sequence 2:NP_596381.1 Gene:rpn2 / 2540191 PomBaseID:SPBC17D11.07c Length:965 Species:Schizosaccharomyces pombe


Alignment Length:1027 Identity:442/1027 - (43%)
Similarity:636/1027 - (61%) Gaps:91/1027 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKLAGMVASK 67
            :|||.|:::||||...:|:|.||.|:...:|:.|||||:.:.|||:::||.||||.:||.:|.||
pombe    12 ITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFPERELAALVVSK 76

  Fly    68 VFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENPKEASVVDERLEG 132
            |:|:||.:::||.:||.:|..|..:..::|.||:|.||||.:|.:..|..:||| |..:||||.|
pombe    77 VYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCIDMFIHKSAELYKNPK-ADPLDERLSG 140

  Fly   133 IVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEV 197
            :|..:.|:|...|::|..||||:|..|:|.. :.|:.:|....:..|...:.|:::.:..|||.:
pombe   141 VVEGIFQKCYAKNEWRHVLGIAIEAHRLDII-EYILNADKETDLKPYVLELAMTVVLDIEFRNRL 204

  Fly   198 LRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSSVETNNLMAYQIAFDLYESATQE 262
            ||.|:|.:.....|||.::.:|::.|.|....|::|..|:..:.:.:.|.|||:||||.:||.||
pombe   205 LRLLLSSFLTETEPDYFSVGKCVVHLNDASVAAKLLMKLSSQNDDKSLLTAYQLAFDLEDSAPQE 269

  Fly   263 FLGNVLQHLKNTAPIPTALPSTFKPQGTTSEDGAKSEGDKSKSDEDITEETPADDKVERTIDSLN 327
            ||.:|:.          .|||   |....||:.|.::..|..|       :|..           
pombe   270 FLNSVMD----------LLPS---PSVANSEEDANADSKKEDS-------SPCG----------- 303

  Fly   328 EVEKLHQKNIEKLISILSGEVSIDLQLQFLIRSNHADLQVLRGTKEAV--RVSICHTATVIANAF 390
                       .:|.|||||.::....:||...|:.|:.:|..||:::  |.|:.|.|...||||
pombe   304 -----------YIIRILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFANAF 357

  Fly   391 MHSGTTSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSSG-YSE 454
            |:.||:||.|.||||.||::|.||:|.||||:|||||||:...::.:::.|||:|..|||. |||
pombe   358 MNFGTSSDSFFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSE 422

  Fly   455 GGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQD 519
            |||.||:||||||||..:.:||.:|||..::|.|::|..||:||.||.:..:.|||.:|..|:.|
pombe   423 GGAFYAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFND 487

  Fly   520 DAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTS 584
            :||.|.||||:||::|||:.::.||::|:.||.|||||||:|||.:||:|.::.|.:|||.::..
pombe   488 NAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEADGIIKE 552

  Fly   585 LSSDKDPVLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCP 649
            |::|.||.||.:||:..|:||.||.::|.:|.:||::|||||||||||||.|:|||.|:.|....
pombe   553 LNNDLDPTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALGFICFKDPNALI 617

  Fly   650 SVVSLLAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQH 714
            |.|.||.:|||||||||:|:|||||||.:|...|:.||..:|: |..:||||||:||.||||.||
pombe   618 STVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLLSRLVE-DATDFVRQGAMIAQAMILTQH 681

  Fly   715 TDQSCPKSTFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLSLQSRTGHTNLQAVVGM 779
            .||...|.:..|:.:.:||:.||||.:||.||.||||||||||||.|::||:.||...|.|:||:
pombe   682 NDQLNSKVSGIRKHFEQVINEKHEDALAKLGATLAQGIIDAGGRNVTIALQTATGSLKLSAIVGL 746

  Fly   780 LAFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKV 844
            ..|.||||||||.|.:||:|:||.:|||:.:|..||..:.|..:|.|:|||....:..::..:||
pombe   747 TVFLQYWYWFPLTHFMSLSFSPTALIGLDKNLNAPKFSFISNVRPKLFAYPPKSVQPTAKTVQKV 811

  Fly   845 ATAVLSIAARQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEKKK 909
            .|||||...:.:.|  |.:.|.||      :.:|:   .|:|.|.|                ||.
pombe   812 ETAVLSTTVKAQAR--AKRAEREK------ASKGS---NDDEMKID----------------KKT 849

  Fly   910 EEDKEKEAAGTSSEKDKDKEKD---KKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSYEPLK 971
            .|:||    .|..|.|::|.:|   ....|:.||.||.|:|..||:..||..:|......|.|::
pombe   850 TEEKE----ATPMEMDEEKSQDISINGNSKKEEPKSETLENFTRVVPAQLPYISFNLNGRYYPVR 910

  Fly   972 DVTIGGIIVF--QHTGKAEDQELVE----PVAAFGPMNDEEKEPEPPEPFEY 1017
            ..| ||:::.  :.:.||.|  |:|    .|.|.......|:|..|||.|||
pombe   911 KFT-GGVLMLIDRESDKAPD--LIELNRDAVPASADTEPGEQEASPPEDFEY 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn2NP_001263057.1 RPN2 1..1003 CDD:227446 434/1011 (43%)
PC_rep 456..489 CDD:280095 18/32 (56%)
PC_rep 526..559 CDD:280095 19/32 (59%)
HEAT repeat 581..602 CDD:293787 8/20 (40%)
HEAT repeat 616..639 CDD:293787 16/22 (73%)
HEAT repeat 651..676 CDD:293787 18/24 (75%)
PC_rep 666..701 CDD:280095 17/34 (50%)
rpn2NP_596381.1 RPN2 10..962 CDD:227446 442/1027 (43%)
Ins145_P3_rec 261..>346 CDD:302989 33/126 (26%)
PC_rep 386..417 CDD:280095 15/30 (50%)
PC_rep 424..457 CDD:280095 18/32 (56%)
PC_rep 494..528 CDD:280095 20/33 (61%)
HEAT repeat 549..573 CDD:293787 9/23 (39%)
HEAT repeat 585..610 CDD:293787 19/24 (79%)
PC_rep 634..668 CDD:280095 17/34 (50%)
HEAT repeat 650..676 CDD:293787 13/26 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 277 1.000 Domainoid score I310
eggNOG 1 0.900 - - E1_COG5116
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2100
Inparanoid 1 1.050 786 1.000 Inparanoid score I72
OMA 1 1.010 - - QHG53911
OrthoFinder 1 1.000 - - FOG0004235
OrthoInspector 1 1.000 - - oto100434
orthoMCL 1 0.900 - - OOG6_101410
Panther 1 1.100 - - LDO PTHR10943
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1203
SonicParanoid 1 1.000 - - X2978
TreeFam 1 0.960 - -
1413.860

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