DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slbp and Slbp

DIOPT Version :10

Sequence 1:NP_477480.1 Gene:Slbp / 43448 FlyBaseID:FBgn0041186 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001124460.1 Gene:Slbp / 681062 RGDID:1584682 Length:275 Species:Rattus norvegicus


Alignment Length:45 Identity:12/45 - (26%)
Similarity:18/45 - (40%) Gaps:9/45 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 SCELSFLLTNIRSTHICTA----TDGGAPCVGDQGAPVTVTENGE 247
            ||: :.||..:.|...|..    ...|.|.:    .|..:.|:||
  Rat     6 SCQ-TLLLVAVCSVFCCRTLALPAISGYPDI----RPSALDEDGE 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlbpNP_477480.1 SLBP_RNA_bind 191..258 CDD:464587 12/45 (27%)
SlbpNP_001124460.1 SLBP_RNA_bind 130..199 CDD:464587
Blue background indicates that the domain is not in the aligned region.

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