DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pglym78 and GPM2

DIOPT Version :9

Sequence 1:NP_001034075.1 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_010263.1 Gene:GPM2 / 851541 SGDID:S000002179 Length:311 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:93/304 - (30%)
Similarity:143/304 - (47%) Gaps:61/304 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAV----KDAGLEF-DVAHTSVLTRAQV 66
            :.::|||:||.|.:|.||||.||.|:|||:|:|..:.:.:    |...|.. .:.:||.|.|.|.
Yeast    12 LFLLRHGQSELNHENIFCGWIDAKLTEKGKEQARHSAELIEQYCKANNLRLPQIGYTSRLIRTQQ 76

  Fly    67 TLASILK-----------------------ASGHKE---IPIQKTWRLNERHYGGLTGLNKAETA 105
            |:.::.:                       .|..|:   |||.:||||||||||...|..|....
Yeast    77 TIETMCEEFKLKPQLQVVYDFNKIKLGDEFGSDDKDNMKIPILQTWRLNERHYGSWQGQRKPNVL 141

  Fly   106 AKYGEAQVQIWRRSFDTPPPPME---------------PGHPYYENIVKDP----RYAEGPKPEE 151
            .:||:.:....||.::..|||::               .|:.:     |:|    :|.......:
Yeast   142 KEYGKDKYMFIRRDYEGKPPPVDLDREMIQQENEKGSSTGYEF-----KEPNRQIKYELECSNHD 201

  Fly   152 --FPQFESLKLTIERTLPYWNDVIIP---QMKEGKRILIAAHGNSLRGIVKHLDNLSEDAIMALN 211
              .|..|||:..:.|..|:..:||:.   |..|.. .||..||:|:|.::|.|:.:|:|.|..::
Yeast   202 IVLPDSESLREVVYRLNPFLQNVILKLANQYDESS-CLIVGHGSSVRSLLKILEGISDDDIKNVD 265

  Fly   212 LPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAAQGKAK 255
            :|.|||.|.|||:|.......:|..|.|:.|...|.|..:|..|
Yeast   266 IPNGIPLVVELDKNNGLKFIRKFYLDPESAKINAEKVRNEGFIK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym78NP_001034075.1 HP 5..255 CDD:299704 92/302 (30%)
GPM2NP_010263.1 GpmA 9..292 CDD:223661 86/285 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346324
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0588
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X392
TreeFam 1 0.960 - -
54.700

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