DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pglym78 and PGAM1

DIOPT Version :9

Sequence 1:NP_001034075.1 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_002620.1 Gene:PGAM1 / 5223 HGNCID:8888 Length:254 Species:Homo sapiens


Alignment Length:251 Identity:172/251 - (68%)
Similarity:206/251 - (82%) Gaps:1/251 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YKIVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAVKDAGLEFDVAHTSVLTRAQVTLA 69
            ||:|::|||||.||.:|:|.|||||:||..|.|||...|:|::|||.|||:..|||..||..||.
Human     4 YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIRTLW 68

  Fly    70 SILKASGHKEIPIQKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPMEPGHPYY 134
            ::|.|.....:|:.:|||||||||||||||||||||||:|||||:|||||:|.|||||||.||:|
Human    69 TVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVPPPPMEPDHPFY 133

  Fly   135 ENIVKDPRYAEGPKPEEFPQFESLKLTIERTLPYWNDVIIPQMKEGKRILIAAHGNSLRGIVKHL 199
            .||.||.|||:..: ::.|..||||.||.|.||:||:.|:||:|||||:||||||||||||||||
Human   134 SNISKDRRYADLTE-DQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHL 197

  Fly   200 DNLSEDAIMALNLPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAAQGKAK 255
            :.|||:|||.||||||||.|||||:|.||:..||||||||||:||:||||||||||
Human   198 EGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVRKAMEAVAAQGKAK 253

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Pglym78NP_001034075.1 HP 5..255 CDD:299704 170/249 (68%)
PGAM1NP_002620.1 gpmA 4..253 CDD:184516 170/249 (68%)
Substrate binding. /evidence=ECO:0000269|PubMed:15883004, ECO:0000269|PubMed:23653202 10..17 5/6 (83%)