DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pglym78 and tigarb

DIOPT Version :10

Sequence 1:NP_524546.2 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_956485.1 Gene:tigarb / 393160 ZFINID:ZDB-GENE-040426-885 Length:257 Species:Danio rerio


Alignment Length:275 Identity:71/275 - (25%)
Similarity:111/275 - (40%) Gaps:64/275 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YKIVMVRHGESEWNQKNQFCG-WYDANLSEKGQEEALAAGKAVKDAGLEFDVAHTSVLTR----A 64
            :.:.:|||||:::|:.....| ..|..||:.|.::|.|||:.:||  |.|.....|.|.|    |
Zfish     4 FALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKD--LHFTNVFVSNLQRAIQTA 66

  Fly    65 QVTLASILKASGHKEI--PIQKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPM 127
            ::.|.:.|.:|..:.|  |:     |.||.:|...|..| |.......|..|..|   |..|   
Zfish    67 EIILGNNLHSSATEMILDPL-----LRERGFGVAEGRPK-EHLKNMANAAGQSCR---DYTP--- 119

  Fly   128 EPGHPYYENIVKDPRYAEGPKPEEFPQFESLKLTIER----------TLPYWND--VIIPQMKEG 180
             ||....|.:           ...|..|  ||...:|          ::|...|  ||.....:|
Zfish   120 -PGGETLEQV-----------KTRFKMF--LKSLFQRMFEEHGSALSSVPSEADQPVIAGLADDG 170

  Fly   181 KR-----ILIAAHGNSLRGIVKHLDNLSEDAIMALNLPTGIPFVYELDENFKPVVS---MQFLGD 237
            .:     .|:.:||..:|..|:|   |.||  :...||.|:    ::::.|.|..:   .:|:..
Zfish   171 AQNVPVHALMVSHGAFIRISVRH---LVED--LQCCLPAGL----KMNQVFSPCPNTGISRFIFT 226

  Fly   238 EETVKKAIEAVAAQG 252
            ....:..:.|...||
Zfish   227 IHREESVLRATRIQG 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym78NP_524546.2 HP 5..255 CDD:472174 71/275 (26%)
tigarbNP_956485.1 His_Phos_1 6..226 CDD:459751 68/256 (27%)

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