DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pglym78 and pgam1b

DIOPT Version :9

Sequence 1:NP_001034075.1 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_958457.2 Gene:pgam1b / 327165 ZFINID:ZDB-GENE-030131-5376 Length:254 Species:Danio rerio


Alignment Length:251 Identity:168/251 - (66%)
Similarity:206/251 - (82%) Gaps:1/251 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YKIVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAVKDAGLEFDVAHTSVLTRAQVTLA 69
            ||:|::|||||.|||:|:||||:||:||:.|:.||...|:|:||||.|||:.:||||.||..||.
Zfish     4 YKLVLIRHGESVWNQENRFCGWFDADLSDTGEAEAKRGGQALKDAGYEFDICYTSVLKRAIRTLW 68

  Fly    70 SILKASGHKEIPIQKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPMEPGHPYY 134
            .:|.......:|:.:|||||||||||||||||||||||:|||||:|||||:|.|||||:|.|.:|
Zfish    69 LVLDGIDQMWLPVHRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDIPPPPMDPEHDFY 133

  Fly   135 ENIVKDPRYAEGPKPEEFPQFESLKLTIERTLPYWNDVIIPQMKEGKRILIAAHGNSLRGIVKHL 199
            ..|.||.||.:..: ::.|..||||.||.|.||:||:.|:||:|||||:||||||||||||||||
Zfish   134 TAISKDRRYGDLTE-DQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHL 197

  Fly   200 DNLSEDAIMALNLPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAAQGKAK 255
            :.:||:|||.||||||||.:||||:|.|||..||||||||||:||:||||||||||
Zfish   198 EGMSEEAIMELNLPTGIPILYELDKNLKPVKPMQFLGDEETVRKAMEAVAAQGKAK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym78NP_001034075.1 HP 5..255 CDD:299704 166/249 (67%)
pgam1bNP_958457.2 gpmA 4..253 CDD:184516 166/249 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595445
Domainoid 1 1.000 183 1.000 Domainoid score I3361
eggNOG 1 0.900 - - E1_COG0588
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37647
Inparanoid 1 1.050 354 1.000 Inparanoid score I2211
OMA 1 1.010 - - QHG61896
OrthoDB 1 1.010 - - D496634at33208
OrthoFinder 1 1.000 - - FOG0000615
OrthoInspector 1 1.000 - - mtm6585
orthoMCL 1 0.900 - - OOG6_101500
Panther 1 1.100 - - LDO PTHR11931
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R933
SonicParanoid 1 1.000 - - X392
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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