DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pglym78 and Pgam1

DIOPT Version :9

Sequence 1:NP_001034075.1 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_445742.2 Gene:Pgam1 / 24642 RGDID:3312 Length:254 Species:Rattus norvegicus


Alignment Length:251 Identity:171/251 - (68%)
Similarity:205/251 - (81%) Gaps:1/251 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YKIVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAVKDAGLEFDVAHTSVLTRAQVTLA 69
            ||:|::|||||.||.:|:|.|||||:||..|.|||...|:|::|||.|||:..|||..||..||.
  Rat     4 YKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIRTLW 68

  Fly    70 SILKASGHKEIPIQKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPMEPGHPYY 134
            ::|.|.....:|:.:|||||||||||||||||||||||:|||||:|||||:|.|||||||.||:|
  Rat    69 TVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVPPPPMEPDHPFY 133

  Fly   135 ENIVKDPRYAEGPKPEEFPQFESLKLTIERTLPYWNDVIIPQMKEGKRILIAAHGNSLRGIVKHL 199
            .||.||.|||:..: ::.|..||||.||.|.||:||:.|:||:|||||:||||||||||||||||
  Rat   134 SNISKDRRYADLTE-DQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHL 197

  Fly   200 DNLSEDAIMALNLPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAAQGKAK 255
            :.|||:|||.||||||||.|||||:|.||:..||||||||||:||:||||||||.|
  Rat   198 EGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVRKAMEAVAAQGKVK 253

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Pglym78NP_001034075.1 HP 5..255 CDD:299704 170/249 (68%)
Pgam1NP_445742.2 gpmA 4..253 CDD:184516 170/249 (68%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00950 10..17 5/6 (83%)