DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11882 and C1h10orf88

DIOPT Version :10

Sequence 1:NP_651676.1 Gene:CG11882 / 43446 FlyBaseID:FBgn0039642 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_008758107.1 Gene:C1h10orf88 / 309029 RGDID:1305014 Length:491 Species:Rattus norvegicus


Alignment Length:261 Identity:56/261 - (21%)
Similarity:102/261 - (39%) Gaps:62/261 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TWPQLSGNGLDQLVATRLSDED-VFVKPDLDDVIDENRAVLFSMQSADPPPPCELRFQI-PN-RF 71
            |.|:......:||:|......| |.:|..|.. .|||              ||.:..:. || ..
  Rat    36 TGPRAQDLDFEQLLAPPAQGPDLVSLKSSLSP-RDEN--------------PCFIYLKCGPNGGE 85

  Fly    72 KIAALTLICSAPKVELFIGPLQEYCETIYG----TCVDDEDPEVAVRPYRYDMEIDRSGINDINL 132
            :|.::.::.||..:|:::|  :|||.|..|    |.:|:.:.| .:..|:..:::: |..:...:
  Rat    86 EILSVGILSSARNMEVYLG--EEYCGTSRGKNVCTVLDNSEHE-KILLYKKYLKLE-SPTHACKI 146

  Fly   133 KMLTSASEICVYGALLQV-----APNPNGITTQLPRPMDAQRIQELLQRGGTS------------ 180
            |:|:...|.||..:.:.|     :..|:..:..|...:|...||.:::..|:.            
  Rat   147 KLLSFGEEQCVLISKVVVHLRPRSAKPSPSSPALGSRIDLDNIQTIMESMGSKLSPGAQQLMDMI 211

  Fly   181 --------PLKKEEQA----EKFEQFMSLMKGYSPQAKDQTQET-------APPSTDVAILKEHI 226
                    |::.:.|:    ...:..|:|....|....|:...|       ..||.....||..|
  Rat   212 RFQQQNCLPIRDQLQSVLGTAGHKHLMALQSSPSSGVVDKASSTPFPFRTGLTPSAITENLKALI 276

  Fly   227 D 227
            |
  Rat   277 D 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11882NP_651676.1 PAAT-like 47..179 CDD:464404 30/142 (21%)
C1h10orf88XP_008758107.1 PAAT-like 59..198 CDD:464404 36/157 (23%)

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