DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14516 and lta4h

DIOPT Version :9

Sequence 1:NP_651674.3 Gene:CG14516 / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:494 Identity:116/494 - (23%)
Similarity:193/494 - (39%) Gaps:118/494 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 CTSYHLRRLKAGHDDTPKYDRDVRLPHSIRPLKYNITIEPQLSGNFTFAGSVQIRIRVLEDCY-N 153
            |::.||..:.  |.|   :||.|        ||                |.|.:.:.||||.: :
Zfish    16 CSTKHLNLIY--HVD---FDRHV--------LK----------------GKVALTVEVLEDKFSS 51

  Fly   154 ITMHAEELNISRSDASVHRVQNNGEPEGDGLRIHKQYLVGAKQFF-----VIELYDKLLKDVEYV 213
            :|:.:::|.||       :|..||:.        .::.:|||..|     .|.|..:|.:....:
Zfish    52 LTLDSKDLKIS-------KVSANGQA--------AKFELGAKHKFKGSPLEITLPFELSRGQHVI 101

  Fly   214 VHLRFDGIIEDYLQGFYRSSYEVHNETRWVAS------------TQFQATDARRAFPCFDEPALK 266
            |.:.::             :.......:|:..            :|.|||..|...||.|.|::|
Zfish   102 VEIEYE-------------TSPTATALQWLTPKQTAGKKHPYLFSQCQATHCRTMVPCQDTPSVK 153

  Fly   267 ANFTLHIARPRNMTTISNMPIVSSNDHATMPSYVWDHFAESLPMSTYLVAYAISDFTHISSG-NF 330
            ..:...::.||.:..:.:..........:..|.|...|.:.:||.:||:|..:........| ..
Zfish   154 HTYYAQVSVPRELVALMSALRDGQEPDPSDSSRVIYRFRQPVPMPSYLIAIVVGALESREIGPRS 218

  Fly   331 AVWARADAIKSAEYALSVGPRILTFLQDFFNVTFPL--PKIDMIAL-PEFQAGAMENWGLITFRE 392
            .||:..:.:..|.|..:   ...|.|:...::..|.  .:.|::.| |.|..|.|||..|.....
Zfish   219 RVWSEKEYVDEAAYEFA---ETETMLKTAESLAGPYVWGQYDVLVLPPSFPYGGMENPCLTFVTP 280

  Fly   393 TAMLYDPGVATANNKQRVASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPE- 456
            |.:..|         :.:|.|:.||::|.|.|||||...|...|||||...|:|.:.|..:..| 
Zfish   281 TVLAGD---------RSLAGVIAHEISHSWTGNLVTNRTWEHFWLNEGHTVYIERMIARCMEGEQ 336

  Fly   457 ---------WKQL----DQFVVNELQAVFQLDALSTSHKISHEVFNPQEISEIFDRISYAKGSTI 508
                     ||:|    .||..|        :.|:......|||    :..|.|..:.|.||..:
Zfish   337 LRQFKGIGGWKELHESVKQFGAN--------NVLTNLVPNLHEV----DTDEAFSSVPYEKGFAL 389

  Fly   509 IRMMAHFLTNP-IFRRGLSKYLQEMAYNSATQDDLWHFL 546
            :..:...:..| :|...:..|:|..||.|.|.::..::|
Zfish   390 LYHLEELMGGPEVFMGFVKSYIQLFAYGSVTTEEWKNYL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14516NP_651674.3 Peptidase_M1 113..505 CDD:279741 97/427 (23%)
M1_APN_2 121..576 CDD:189008 108/463 (23%)
ERAP1_C 652..974 CDD:288671
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 115/492 (23%)
M1_LTA4H 18..449 CDD:189006 115/492 (23%)
Leuk-A4-hydro_C 467..606 CDD:286244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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