DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and erap1b

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_956500.2 Gene:erap1b / 393175 ZFINID:ZDB-GENE-040426-934 Length:963 Species:Danio rerio


Alignment Length:958 Identity:319/958 - (33%)
Similarity:499/958 - (52%) Gaps:127/958 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 VRLPHSIRPLKYNITIEPQLSGNFTFAGSVQIRIRVLEDCYNITMHAEELNISRS---DASVHRV 173
            :|||.:|.||.||:.|.|.|: :..|.|||||:|.||:|...|.:|::.|.||.:   ||::.:.
Zfish    45 MRLPDTISPLHYNLLIHPNLT-SLDFTGSVQIQIEVLQDTKTIILHSKNLQISSARLLDANIAQQ 108

  Fly   174 QNNGEPEGDGLRIHKQYLVGAKQFF--VIELYDKLL--KDVEYVVHLRFDGIIEDYLQGFYRSSY 234
            |        .|:: .:|     .:|  :..:.||.|  :...|.|.|.|...:.:...|||:|:|
Zfish   109 Q--------PLKV-LEY-----PYFQQIALVSDKALLKRGHVYSVELHFAANLSESFHGFYKSTY 159

  Fly   235 EV-HNETRWVASTQFQATDARRAFPCFDEPALKANFTLHIARPRNMTTISNMPIVSSNDHATMPS 298
            .. ..:.|.||||||:||.||.|||||||||.||||::.|.|......:||||.:.:.:  ....
Zfish   160 RTSKGDVRVVASTQFEATSARAAFPCFDEPAFKANFSVQIRREAKHIALSNMPKLRTLE--LKNG 222

  Fly   299 YVWDHFAESLPMSTYLVAYAISDFTHISSGN-----FAVWARADAIKSAEYALSVGPRILTFLQD 358
            ...|.|..|:.||||||||.:|||..||..:     .:|:|..:.|..||:||....::|.|..|
Zfish   223 LFEDQFDVSVKMSTYLVAYIVSDFLSISKTSQHGVQISVYAVPEKIDQAEFALDAAVKLLDFYDD 287

  Fly   359 FFNVTFPLPK--------------------IDMIALPEFQAGAMENWGLITFRETAMLYDPGVAT 403
            :|::.:||||                    :|:.|:|:||:||||||||.|:||:|:|:||..::
Zfish   288 YFDIPYPLPKQEKPTIKHAKEEFSVYIICFVDLAAIPDFQSGAMENWGLTTYRESALLFDPHKSS 352

  Fly   404 ANNKQRVASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPEWKQLDQFVVNEL 468
            |::|..:..::.|||||||||||||..||:|:|||||||.:||:::.:...||.:..|.|:....
Zfish   353 ASDKLGITMIIAHELAHQWFGNLVTMQWWNDLWLNEGFAKFMEFVSVNITNPELQVEDYFLGKCF 417

  Fly   469 QAVFQLDALSTSHKISHEVFNPQEISEIFDRISYAKGSTIIRMMAHFLTNPIFRRGLSKYLQEMA 533
            :|: ::|:||:||.:|..|.||.:|.|:||.:||.||:.|:.|:..|||..||:.|:.|||:..:
Zfish   418 EAM-EVDSLSSSHPVSTPVENPAQIQEMFDDVSYDKGACILNMLREFLTPKIFKLGIVKYLKHYS 481

  Fly   534 YNSATQDDLWHFLTVEAKSSGL------------------------LDDSRSVKEIMDTWTLQTG 574
            |.:....:||..||....|.||                        .:|...||.:|:|||||.|
Zfish   482 YQNTVNSNLWESLTNVCDSDGLDEGRLKGDESCRHSASNTGASKWHSEDELDVKAMMETWTLQEG 546

  Fly   575 YPVVKVSRHPNSDVIRLEQVRFVYTNTTREDESLLWYIPITF-TTDSELNFANTRPTTWMPRTK- 637
            :|::.::  .....:||.|.|::.::...:..|.||.:|:|: |:||      |....::.:|| 
Zfish   547 FPLITIA--VKGREVRLSQERYLKSDDLSQTSSFLWQVPLTYITSDS------TTVHRFLLKTKT 603

  Fly   638 --LYELENRELSLAKWFIFNVQQTGYYRVNYDLENW---MAITEHLMDVDNFEDIAPANRAQLID 697
              ||..|.     ..|..|||..:|||.|:|:...|   :.:.:|     |...::..:||.||:
Zfish   604 DVLYLPEE-----VDWIKFNVDMSGYYIVHYEGSGWDDLITLLKH-----NHTALSSNDRASLIN 658

  Fly   698 DVMNLARGSYLSYETAMNLTRYLGHELGHVPWKAAISNFIFIDSMFVNSGDYDL---LKNYLLKQ 759
            :...|.....|..:.|::||.||..|...:|.....:..:.:..:.......:|   :|.|:|:.
Zfish   659 NAFQLVSVGKLPLDKALDLTLYLSKETEIMPVTQGFNELVPLYKLMEKRDMVELENQMKGYILQL 723

  Fly   760 LKKVYDQVGFKDSQDESEDILVKLKRADILSMACHLGHQECIAEASRHFQNWMQTPNPDSNNPIV 824
            .:|:.:|..:.|....||.:|    |:.:|...|..||..|::.|::.|..|..:   |.|..:.
Zfish   724 FQKLIEQQLWTDEGSVSERML----RSYLLLFGCVRGHPPCVSNATQLFNLWRDS---DGNMSLP 781

  Fly   825 PNLRGVVYCSAIQYGTEYEWDFAFERFLKTNVPGEKDLLLNALGCS----KEPWLLYRFLRRGIS 885
            .::...|:  ::...||..|||.||::.::.....|..:..||..|    |..|:    :.:.:.
Zfish   782 NDVTMAVF--SVGARTEDGWDFLFEKYKESMYVSMKSRIKQALMTSPLDHKLKWM----MEQSLE 840

  Fly   886 GQHIRKQDLFRVFAAVSTTVVGQNIAFDFLRNNWQEI--KTYMGSQMSSIHTLFKFATKGFNSKF 948
            |:.|:.|||..|..:||........|:|||:.||..:  |..:||.  ||..:....|..::::.
Zfish   841 GELIKTQDLPYVVTSVSRNPKAYKHAWDFLQANWDSLIKKFDLGSH--SIAHMVVGVTNQYSTRE 903

  Fly   949 QLGEFENFVKDAHWDYD---RPVQQIVEHIETSVDWMNKNYKSIVRWL 993
            .|.|..||......:..   |.:||.||:||.::.||:||...:..||
Zfish   904 MLAEVRNFFSLLQPETGAELRCIQQAVENIEENIRWMDKNLPLLKAWL 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 194/506 (38%)
ERAP1_C 651..976 CDD:463368 89/339 (26%)
erap1bNP_956500.2 M1_APN-Q_like 54..543 CDD:341064 194/506 (38%)
ERAP1_C 614..934 CDD:463368 89/339 (26%)

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