DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment superdeath and Aopep

DIOPT Version :10

Sequence 1:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster
Sequence 2:XP_008769651.1 Gene:Aopep / 290963 RGDID:1309592 Length:886 Species:Rattus norvegicus


Alignment Length:638 Identity:111/638 - (17%)
Similarity:209/638 - (32%) Gaps:209/638 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 FYRSSYEVHNETRWVAS--------TQFQATDARRAFPCFDEPALKANF--TLHIARPRNMTTIS 283
            :|::..|..:.| |.:.        |.....:.|..|||.:.|...:.:  |:..|        :
  Rat   311 WYKTKPEGQSVT-WTSDQDGRPCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAA--------A 366

  Fly   284 NMPIVSSNDHATMPS-----YVWDHFAESLPM--STYLVAYA-----------ISDFTH------ 324
            :..::.|.:.:..|:     |:..|:..::||  ||:.:|..           :.|.|.      
  Rat   367 SFVVLMSGEKSAKPTPLREGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPLR 431

  Fly   325 -----ISSGN--------------------------FA------------VWARADAIKSAEYAL 346
                 ...||                          ||            :|.....:.:|...|
  Rat   432 PSDADFRYGNTCSHMEYPCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSVL 496

  Fly   347 SVGPRILTFLQDFFNVTFPLPKIDMIALP-EFQAGAMENWGLITFRETAMLYDPGVATANNKQRV 410
            .               |.|..::|::.:| .|.:..|.:..:|...::.:        .......
  Rat   497 G---------------THPFSRLDILIVPTNFPSLGMASPHIIFLSQSTL--------TGTSHLC 538

  Fly   411 ASVVGHELAHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPEWKQLDQFVVNELQAVFQLD 475
            .:.:.||:||.|||..:....|::.||:||||:::|.:.       |.:..|...:|.....:|.
  Rat   539 GTRLCHEIAHAWFGLAIGARDWTEEWLSEGFATHLEDIF-------WAEAQQLPPHEALEQQELR 596

  Fly   476 ALSTSHKISHEVFNPQEISEIF-------DRISYAKGSTIIR---------MMAHFLTNPIFRRG 524
            |....|::..|:.|..|..::.       ..:| |.|:::::         |..|:|......|.
  Rat   597 ACLRWHRLQDELQNSPEGMQVLRPNKEKTGHVS-ASGASVVKNGLNPEKGFMQVHYLKGYFLLRF 660

  Fly   525 LSKYLQEMAYNSATQD--DLWH--------FLTV------EAKSSGLLDDSRSVKEIMDTWTLQT 573
            |::.|.|..|....:.  .|:|        ||.:      |.|..||     ||:.|:..|....
  Rat   661 LARTLGEETYFPFLRKFVHLFHGQLILSQDFLQMLLESIPENKRFGL-----SVENIVGDWLECP 720

  Fly   574 GYPV---------------------------VKVSRHPNSDVIRLEQVRFVYTNTTREDESLLWY 611
            |.|.                           ::|:|.|.....|..:..|...:..:....|.|.
  Rat   721 GIPKALQEERKAKDCSPSRLVRQVGSEVAKWIRVNRRPGKRQRRKREAAFEKLSPDQIVLLLEWL 785

  Fly   612 IPITFTTDSELNFANTRPTTWMPRT-----KLYELENRELSLA-KWFIFNVQQTGYYRVNYDLEN 670
            :               ...|..|:|     :.|.|:.::..:. :|....::..  |...||...
  Rat   786 L---------------EQKTLSPQTLHRLQQTYHLQEQDAEVRHRWCELVIKHK--YTKAYDQVK 833

  Fly   671 WMAITEHLMDVDNFEDIAPANRA---QLIDDVMNLARGSYLSYETAMNLTRYL 720
            .....:..|.:..:.::..:..|   ||......|.:| ::...:|..:|..|
  Rat   834 RFLQEDQAMGIYLYGELMVSEDARLQQLAHRCFELVKG-HMDKASAQVVTEML 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 84/451 (19%)
ERAP1_C 651..976 CDD:463368 13/73 (18%)
AopepXP_008769651.1 GluZincin <308..704 CDD:472708 77/432 (18%)
Leuk-A4-hydro_C 773..885 CDD:462686 19/129 (15%)

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