DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg13 and Alg13

DIOPT Version :10

Sequence 1:NP_651673.1 Gene:Alg13 / 43443 FlyBaseID:FBgn0039639 Length:171 Species:Drosophila melanogaster
Sequence 2:XP_038956244.1 Gene:Alg13 / 108349244 RGDID:11453602 Length:988 Species:Rattus norvegicus


Alignment Length:110 Identity:18/110 - (16%)
Similarity:36/110 - (32%) Gaps:42/110 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KFDALISTASTEPALKALQNRKCTKLVIQHGNSQPLTDDEIQLIR----KNYGIQIEQYNFRPNT 74
            :|||.:.|.      |.||...|    :::|.......|:.|:..    |.|...|::       
  Rat   266 EFDAWLDTR------KELQKSDC----LEYGGRYYYLGDKCQVCMEPGGKYYNAHIQE------- 313

  Fly    75 EDIKSADLIIGHAGAGTCMDILNNQKPGLIVINDTLMDNHQLELA 119
                                 ::|:...::|..:...:.|.:.:|
  Rat   314 ---------------------IDNENTSVLVFIEEFAERHLIPMA 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg13NP_651673.1 Glyco_tran_28_C 5..168 CDD:427711 18/110 (16%)
Alg13XP_038956244.1 OTU 19..148 CDD:459237
Tudor_SF 285..363 CDD:470623 9/81 (11%)
Blue background indicates that the domain is not in the aligned region.

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