DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and VHA-A3

DIOPT Version :10

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_568051.1 Gene:VHA-A3 / 830063 AraportID:AT4G39080 Length:821 Species:Arabidopsis thaliana


Alignment Length:859 Identity:362/859 - (42%)
Similarity:516/859 - (60%) Gaps:81/859 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYL 68
            |.|||.|.|.||.:..|:|:..||.||:||||||:|||.:.:.|||.:..:::||.||.||:|:.
plant    16 LMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMARKIRFF 80

  Fly    69 EKEIKKDGIPMLD-TGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKHIL 132
            ..::.|.|:|..: .|:..:.    ::.|:|....:||.||.|:|.|.:.|:|::.||.|.|.:|
plant    81 RDQMSKAGVPAKEMQGKENDI----DLDDVEVKLGELEAELVEINANNDKLQRSYNELMEYKLVL 141

  Fly   133 RKTQVFFDESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQ---------LLGEEGVRASQPG 188
            :|...||          |.|:.|:        ||.|.|.|..|         ||.||  ::....
plant   142 QKAGEFF----------SSAHRSA--------ADQQRETESQQAGEDLLESPLLQEE--KSIDST 186

  Fly   189 QNLKLGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQ 253
            :.:||||:.|::.||:...|||:|:||.|||:|:||.:||.|:.||.:|::..|:||::|:.|::
plant   187 KQVKLGFLTGLVPREKSMVFERILFRATRGNIFIRQTVIEEPVIDPNSGEKAEKNVFVVFYSGER 251

  Fly   254 LKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNW 318
            .|:::.||||.|.|..||..|....:.:|...|..|:.:|.|.:......|:.:|.......:.|
plant   252 AKSKILKICEAFGANRYPFSEDLGRQAQMITEVSGRLSELKTTIDAGLGQRNILLQTIGDKFELW 316

  Fly   319 FVKVRKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTF 383
            .:||||.||||||||:.:||||:|||:||.|.|:.....||.||:|....|.|.|..|...::|.
plant   317 NLKVRKEKAIYHTLNMLSLDVTKKCLVAEGWSPVFASREIQDALQRAAVDSNSQVGSIFQVLRTK 381

  Fly   384 ENPPTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWM 448
            |:||||.||||||.|.|.::||||||.|:|.||..:||:||||||||||||.|||..:.|..:::
plant   382 ESPPTYFRTNKFTSAIQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGICILLATMYL 446

  Fly   449 IRKEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWH----LSYN 509
            |.|||.||:||. .:|..:.|||||:|.:|.:||:|||||||:.||....:|....:    :|.:
plant   447 ILKEKKLASQKL-GDIMEMAFGGRYVILMMSLFSIYTGLIYNEFFSIPFPLFAPSAYDCRDVSCS 510

  Fly   510 KSTVMENKFLQLSPKGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMS 574
            ::|.     :.|....|    .||||:||:|. ...:::.|.|:.|||:||:.||..|..|::||
plant   511 EATT-----IGLIKVRD----TYPFGLDPVWH-GSRSELPFLNSLKMKMSILLGVSQMNLGIIMS 565

  Fly   575 WHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPS---ILITF 636
            :.|..:|::.:::.::||||::||..||.|:.:|:.|||              |..|   :....
plant   566 YFNARFFKSSVNIWFQFIPQMIFLNSLFGYLSVLIIIKW--------------CTGSQADLYHVM 616

  Fly   637 IDMVLFNTPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIM---QARKQANVQPI 698
            |.|.|    .|..|..|..:|..|..:|::.:.:|:..:|.|||.||.::.   :||.|.  |..
plant   617 IYMFL----SPMDELGENQLFPHQKTLQLVLLFLALVSVPCMLLPKPFILKKQHEARHQG--QAY 675

  Fly   699 AGATSDAEAGGVSNSGSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAH 763
            |......|:..|..:|  ||..|| ||.|.||||:||.|||||:|||:||:||||||||||||||
plant   676 APLDETDESLHVETNG--GGSHGH-EEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAH 737

  Fly   764 AQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVEFQSK 828
            ::|:.|.:..||.:......|:..||...||.|   .|||:|::||.||||||.|||||||||:|
plant   738 SELSSVFYEKVLLLAWGYNNPLILIVGVLVFIF---ATVGVLLVMETLSAFLHALRLHWVEFQNK 799

  Fly   829 FYKGQGYAFQPFSF 842
            ||:|.||.|.||:|
plant   800 FYEGDGYKFAPFTF 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 V_ATPase_I 27..842 CDD:460232 350/834 (42%)
VHA-A3NP_568051.1 V_ATPase_I 39..813 CDD:460232 350/834 (42%)

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