DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-1 and VHA-A1

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_850122.1 Gene:VHA-A1 / 817400 AraportID:AT2G28520 Length:817 Species:Arabidopsis thaliana


Alignment Length:850 Identity:351/850 - (41%)
Similarity:487/850 - (57%) Gaps:53/850 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYL 68
            |.|||:|.|.||.:..|:|:..::.||||||:||||||.|.:.|||.|.|:|:||.||.||||:.
plant    13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVKRCGEMSRKLRFF 77

  Fly    69 EKEIKKDGI---PMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            :.:|.|.|:   |.|:.  .|:.    .:.|||......|:|:.|:|.|:|.|::.:.||.|.|.
plant    78 KDQIDKAGLRCSPRLEI--EPDI----ALGDLERQLADHEHEVLEMNSNSEKLRQTYNELLEFKI 136

  Fly   131 ILRKTQVFFDESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKLG- 194
            :|.|...|...|.............|.|       .|....|.|.||.:|    ..||.:.:.| 
plant   137 VLEKASGFLVSSNTHAIGEEIELHESTY-------SNNGFIETASLLEQE----MNPGHSNQSGL 190

  Fly   195 -FVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRV 258
             |::|:|.:::|..|||||:||.|||:...|...:..:.||:..:.|.|.||::||.|:|.:|::
plant   191 RFISGIINKDKLLKFERMLFRATRGNMLFNQTTSDEEIMDPSTSEMVEKVVFVVFFSGEQARTKI 255

  Fly   259 KKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVR 323
            .||||.|.|..||.||....:|::...|::|:.||...|.....||:..|.:...:|.||...||
plant   256 LKICEAFGANCYPVPEDTTKQRQLTREVLSRLSDLEATLDAGTRHRNNALNSVGYSLTNWITTVR 320

  Fly   324 KIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPT 388
            :.||:|.|||:.|.|||:|||:.|.|.|......|...|:|.|..|.|.|..|.:.||..|:|||
plant   321 REKAVYDTLNMLNFDVTKKCLVGEGWCPTFAKTQIHEVLQRATFDSSSQVGVIFHVMQAVESPPT 385

  Fly   389 YNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKEK 453
            |.||||.|.|||.:|||||||.|:|.|||.|:::|:||||||||||.|||..:.|..|:::.:|:
plant   386 YFRTNKLTNAFQEIIDAYGVARYQEANPAVYSVVTYPFLFAVMFGDWGHGLCLLLGALYLLARER 450

  Fly   454 GLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLSYNKSTVMENKF 518
            .|:.||. .....:.|||||:|.||.:||:|.|||||:.||...:|||...: ....:|..:...
plant   451 KLSTQKL-GSFMEMLFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGGSAY-KCRDTTCSDAYT 513

  Fly   519 LQLSPKGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMSWHNHTYFRN 583
            :.|....|    |||||:||.|: ....::.:.|:.|||:||:.|:..|..|:::|:.|..:|.:
plant   514 VGLIKYRD----PYPFGVDPSWR-GSRTELPYLNSLKMKMSILLGIAQMNLGLILSFFNARFFGS 573

  Fly   584 RISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPS---ILITFIDMVLFNTP 645
            .:.:.|:||||::||..||.|:.||:.|||              |..|   :....|.|.|    
plant   574 SLDIRYQFIPQMIFLNSLFGYLSLLIIIKW--------------CTGSQADLYHVMIYMFL---- 620

  Fly   646 KPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAGATSDAEAGGV 710
            .|..|..|..:|.||..:|::.:|:|...:|.||..||..:.:...:.......|....:|....
plant   621 SPTEELGENELFWGQRPLQIVLLLLAFIAVPWMLFPKPFALRKIHMERFQGRTYGVLVSSEVDLD 685

  Fly   711 SNSGSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAHAQLAEVLWTMVL 775
            ....|..|||.||||...||||:||.||:||:||||||:||||||||||||||::|:.|.:..||
plant   686 VEPDSARGGGHHEEEFNFSEIFVHQLIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVL 750

  Fly   776 SIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPF 840
            .:....|..:..::...||||   .|..||::||.||||||.||||||||..||:.|.||.|:||
plant   751 LLAWGYENILIRLIGVAVFAF---ATAFILLMMETLSAFLHALRLHWVEFMGKFFNGDGYKFKPF 812

  Fly   841 SFDAI 845
            ||..|
plant   813 SFALI 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 338/822 (41%)
V_ATPase_I 28..842 CDD:279793 338/821 (41%)
VHA-A1NP_850122.1 NtpI 14..814 CDD:224188 347/844 (41%)
V_ATPase_I 37..814 CDD:279793 338/821 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 601 1.000 Domainoid score I37
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3795
Inparanoid 1 1.050 618 1.000 Inparanoid score I211
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D181796at2759
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - mtm1001
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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