DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and atp6v0a2a

DIOPT Version :10

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_009303407.1 Gene:atp6v0a2a / 561469 ZFINID:ZDB-GENE-091113-4 Length:848 Species:Danio rerio


Alignment Length:878 Identity:403/878 - (45%)
Similarity:564/878 - (64%) Gaps:73/878 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            |||.||||||.|.||||||.:||||:|||||:|||:||||||.|::|||:||:|::||:||||.|
Zfish     1 MGSGFRSEEMCLAQLFLQSGSAYACISELGEMGLVEFRDLNPSVSSFQRRFVSEIKRCEEMERIL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            .||.:||:|..|.:.:....|.||.|:.::::....::||.||.||.:|.|.|:||.|||.|..|
Zfish    66 GYLLREIRKANIAVPEAEVPPVAPAPKNVLEIMEQLQRLEVELSEVAKNKEKLQRNLLELMEYTH 130

  Fly   131 ILRKTQVFFDESVPTVYKSSGAYSSSKYRRY-PQMADNQNEDEQAQLLGEEGVRASQPGQNL--K 192
            :||.|:.|             .:|.|::... ||.       |:...|..|.|......|.|  |
Zfish   131 MLRITRSF-------------VHSRSRHEALGPQY-------EEFPSLETESVTGCTSMQRLGAK 175

  Fly   193 LGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTR 257
            ||||:|:|.|.::.||||||||.|:|...|..|.::..|.|...|:.....||:|.|.|||:..:
Zfish   176 LGFVSGLIQRVKVEAFERMLWRVCKGYTILSYAEVDESLADLDTGEIRKNVVFLISFWGDQIGQK 240

  Fly   258 VKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKV 322
            |:|||:.:...:||.||...:|.::...:.|||:||:.||.:|:|:..:||..|:::.::|.::|
Zfish   241 VQKICDCYHCHIYPHPETDEERADVMDSLRTRIQDLHNVLHRTEDYLKQVLHKASESAQSWVLQV 305

  Fly   323 RKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPP 387
            :|:|||||.|||.:.|||.||||||.|.|:.|:..::.||..|:.:..::||..:||:.:.:.||
Zfish   306 KKMKAIYHILNLCSFDVTNKCLIAEVWCPVSDLANLRRALEEGSRKGDATVPSFVNRIPSSDTPP 370

  Fly   388 TYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKE 452
            |..|:||||..||::::||||..|||::|||:|||||||||||||||||||:::.||.|||:..|
Zfish   371 TLLRSNKFTSGFQSIVEAYGVGDYREVSPAPFTIITFPFLFAVMFGDLGHGSVLTLFALWMVLTE 435

  Fly   453 KGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHL-------SYNK 510
            |....::..|||....|.|||||.:||:||:||||||||.||||||||||.|.:       .:..
Zfish   436 KDHTRRRPGNEIRMTLFDGRYIILMMGLFSIYTGLIYNDCFSKSLNIFGSAWSVKAMFTEQEWTN 500

  Fly   511 STVMENKFLQLSP--KGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVM 573
            .|:..|..|.|:|  .|.:.| |||.|:||||.:| .|::.|.|:||||:|:|.||:||.||||:
Zfish   501 ETLRSNMLLTLNPNVSGVFSG-PYPLGIDPIWNMA-VNRLTFLNSYKMKMSVIIGVVHMSFGVVL 563

  Fly   574 SWHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFID 638
            |..||.:||.:..:...|:|:|:|||.||.|:..::|.||:.:.|.:.:     .||||||.||:
Zfish   564 SVFNHLHFRQKYKIYLLFLPELLFLLCLFGYLAFMIFYKWLAYTARDSQ-----LAPSILIHFIN 623

  Fly   639 MVLFNTPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLI----------------- 686
            |.|...      |..:.::.||..:||..|:||:..:||:||.|||.:                 
Zfish   624 MFLMQA------NATSPLYPGQMGLQVFLVVVALLSVPVLLLGKPLYLYWLHHGGKSLGIHRVCL 682

  Fly   687 ----MQARKQANVQPIAGATSDAEAGGVSNSGSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSV 747
                .:..::.:.:.::.:....|..|:|.||.       .:|.:..::|:||:||||||.||.:
Zfish   683 CSCGYERVRRVSEEDLSPSVVHDEEEGLSESGG-------PQEFDFGDVFLHQAIHTIEYSLGCI 740

  Fly   748 SHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLS 812
            |:|||||||||||||||||:||||.||:.:||:....:|.|.|..||:.:|:||:.||::|||||
Zfish   741 SNTASYLRLWALSLAHAQLSEVLWAMVMRLGLRISSRLGVIFLVPVFSVFAVLTISILLVMEGLS 805

  Fly   813 AFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAI 845
            ||||.|||||||||:|||.|.|..|.||.|..:
Zfish   806 AFLHALRLHWVEFQNKFYSGAGVKFAPFDFSLL 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 V_ATPase_I 27..842 CDD:460232 382/847 (45%)
atp6v0a2aXP_009303407.1 V_ATPase_I 27..835 CDD:460232 382/847 (45%)

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