DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and atp6v0a1b

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_009295518.1 Gene:atp6v0a1b / 553691 ZFINID:ZDB-GENE-050522-215 Length:868 Species:Danio rerio


Alignment Length:906 Identity:527/906 - (58%)
Similarity:644/906 - (71%) Gaps:102/906 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            ||.|||||||.|.||||||||||.|||||||||:|||||||||||.||||||||||||:||:|||
Zfish     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGMVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            |::||||||..||.:||||:||.|.||:|||||||||||||||:|:|.|.||||:||||||||||
Zfish    66 RFVEKEIKKANIPTMDTGENPEVPFPRDMIDLEATFEKLENELKEINTNQEALKKNFLELTELKH 130

  Fly   131 ILRKTQVFFDESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQLL--GEEGVRASQPGQNLKL 193
            |||:||.||||                      |.|....:|.:.||  .|.|     .|..|:|
Zfish   131 ILRRTQQFFDE----------------------MEDPNLLEESSSLLDPSEAG-----RGAPLRL 168

  Fly   194 GFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRV 258
            |||||||.|||:|.|||||||.|||||||||..||.||||||.|||||||||||||||||||.||
Zfish   169 GFVAGVINRERIPTFERMLWRVCRGNVFLRQTEIEDPLEDPTTGDQVHKSVFIIFFQGDQLKNRV 233

  Fly   259 KKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVR 323
            |||||||||:||||||.|.:|:|||.||.|||:||..||.||:|||.|||.||||.::.||:|||
Zfish   234 KKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKTMRVWFIKVR 298

  Fly   324 KIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPT 388
            |:|||||||||.|:||||||||||.|.|:.|:::||.|||||||||||:||.|||||||.:.|||
Zfish   299 KMKAIYHTLNLCNIDVTQKCLIAEVWCPVSDLDSIQFALRRGTERSGSTVPSILNRMQTKQTPPT 363

  Fly   389 YNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKEK 453
            ||:|||||..||.::||||:.:|||:||||||||||||||||||||:|||.:|....|:::.:|.
Zfish   364 YNKTNKFTSGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDMGHGVLMTSAALYLVLRET 428

  Fly   454 GLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHL--------SYNK 510
            .|.|||:|||::|:.|.|||||.|||:||:||||||||.||||||:|.|.|.:        ::..
Zfish   429 RLLAQKSDNEMFNMIFAGRYIILLMGMFSVYTGLIYNDCFSKSLNMFSSGWSVRPMFAPNGNWTD 493

  Fly   511 STVMENKFLQLSP--KGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVM 573
            .|:..|..|||:|  .|.: |.|||.|:||||.:| |||:.|.|::|||:|:|.|||||:|||.:
Zfish   494 QTLESNSVLQLNPSVSGVF-GGPYPLGIDPIWNIA-ANKLTFLNSFKMKMSVILGVIHMLFGVTL 556

  Fly   574 SWHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFID 638
            |..||.||:..:::...|||::||:..||.|::||:|.|||.:.|...|.     |||:||.||:
Zfish   557 SLFNHLYFKKPLNIFLNFIPEIVFMSSLFGYLILLIFYKWIAYDAVTSKD-----APSLLIAFIN 616

  Fly   639 MVLFN----TPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQ----------- 688
            |.|||    |.||        ::.||..||.|.|::|:.|:||||:.|.:::.:           
Zfish   617 MCLFNYNDPTNKP--------LYRGQAGIQSLLVVIALACVPVMLVVKTMILRRQHLWKKHLSQM 673

  Fly   689 --ARKQANVQPIAGATSDAEAGGVSNSGSH--GG--------------------------GGGHE 723
              ||...|::.:. .|..:...|::..|:.  ||                          |..|.
Zfish   674 RDARPAENLETLE-QTGTSSPPGLTQQGTQKFGGVRVGNGPTEDEAEIIDHDQLSQHSEEGDEHS 737

  Fly   724 EEE--ELSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVG 786
            |||  ...::.:||:||||||.||.:|:|||||||||||||||||:||||.||:.:||......|
Zfish   738 EEEPFNFGDMAVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWGMVMRLGLSSRSGGG 802

  Fly   787 GIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAIIE 847
            ...|:.:|:.:|.|||.||::|||||||||.|||||||||:|||.|||:.|.||||::|:|
Zfish   803 FFGLSIIFSAFATLTVCILLIMEGLSAFLHALRLHWVEFQNKFYTGQGFKFVPFSFESILE 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 501/873 (57%)
V_ATPase_I 28..842 CDD:279793 500/872 (57%)
atp6v0a1bXP_009295518.1 NtpI 27..860 CDD:224188 503/875 (57%)
V_ATPase_I 28..858 CDD:279793 500/872 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582320
Domainoid 1 1.000 963 1.000 Domainoid score I34
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1011 1.000 Inparanoid score I279
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - otm25283
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - LDO PTHR11629
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2333
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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