DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and atp6v0a2

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001016223.1 Gene:atp6v0a2 / 548977 XenbaseID:XB-GENE-960957 Length:845 Species:Xenopus tropicalis


Alignment Length:880 Identity:405/880 - (46%)
Similarity:562/880 - (63%) Gaps:74/880 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            |||.||||.|.|.||||||.:||.|||||||:||.:||||||.|:|||||||.||::|:||||.|
 Frog     1 MGSFFRSEAMCLAQLFLQSGSAYDCVSELGEMGLAEFRDLNPQVSAFQRKFVGEVKKCEEMERIL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            .||.:||:|..||:.:...:||||.|:.::|::...:|||.||||||:|.|.|::|.||:.|..:
 Frog    66 GYLMQEIQKANIPVPEESLTPEAPLPKHVLDIQEQLQKLEVELREVNKNKEKLQKNLLEMIEYTY 130

  Fly   131 ILRKTQVFFDESVPTVYKSSGAYSS--SKYRRYPQMADNQNEDEQA-QLLGEEGVRASQPGQNLK 192
            :||.|...       |::|:...:|  |.|..:|.:......|... |.||            .|
 Frog   131 MLRVTNYL-------VHRSNEHETSAHSTYEEFPALEKESLIDYTCMQRLG------------AK 176

  Fly   193 LGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTR 257
            ||||:|::.|.:|.:||:||||.|:|...|....::..|..|...:.....||::.:.|||:..:
 Frog   177 LGFVSGLVHRAKLESFEKMLWRVCKGYTVLTYQELDEYLLHPDTEEPTRWFVFVVSYWGDQIGQK 241

  Fly   258 VKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKV 322
            ||||||.:...|||...:..:||.:...:.|||:||:.|:.||.|:..:||..|::::..|.:::
 Frog   242 VKKICECYDCHLYPYTNSAEERRNLLSELNTRIQDLHKVISQTDDYLKQVLFKASESVYKWVIQI 306

  Fly   323 RKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPP 387
            :|:|||||.||....|||.||||||.|.|:.|:..::.||..|:.:||.|||..:||:.:.:.||
 Frog   307 KKMKAIYHVLNFCRFDVTNKCLIAEVWCPVADLPNVRRALEEGSRKSGVSVPSFINRIPSNDTPP 371

  Fly   388 TYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKE 452
            |..||||||..||.::|||||.:||||||||||||||||||||||||.|||.:|:||.|.|:..|
 Frog   372 TLIRTNKFTSGFQNIVDAYGVGNYREMNPAPYTIITFPFLFAVMFGDFGHGILMSLFALCMVVFE 436

  Fly   453 KGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLSYN------KS 511
            |.....::.:||...||.|||||.|||:||:||||||||.||||:|||||.|::|..      ::
 Frog   437 KSPKLARSQDEIMKTFFEGRYIILLMGLFSIYTGLIYNDCFSKSMNIFGSSWNVSAMFSSNVWRT 501

  Fly   512 TVMENKFLQLSPK--GDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMS 574
            ..:.||||.|:|.  |...|. ||.|:||||.:: .|::.|.|::|||:|:|.|||||.||||:|
 Frog   502 QDLSNKFLTLNPNVTGVLTGV-YPVGIDPIWSLS-TNRLSFLNSFKMKMSVILGVIHMTFGVVLS 564

  Fly   575 WHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDM 639
            ..|:.:|:.|..:...|||:|:|::.:|.|:|.::..||:.::|.:.:.     |||||:.||:|
 Frog   565 AFNYMHFKKRFCIFLVFIPELLFMICIFGYLVFMILYKWLAYSAADSRN-----APSILLHFINM 624

  Fly   640 VLFNTPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQAR-------------- 690
            .:|:.....|.     :|.||..||:..:::...|:||:|..|||.:....              
 Frog   625 FMFSKNDQIPA-----LFTGQVGIQIFLIVLVTLCVPVLLFGKPLYLYWQHHGGQTLRNYRKGYT 684

  Fly   691 --KQANVQPIAGATS-DAEAGGVSNSGSHGGGGGHE-------EEEELSEIFIHQSIHTIEYVLG 745
              ::.:.:.|:...| |.|.|.:::|        ||       |:.:.:::|:.|:||||||.||
 Frog   685 LVRRGSEEEISLVRSHDLEEGEINSS--------HEVQRDRDKEKFDFADVFMSQAIHTIEYCLG 741

  Fly   746 SVSHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEG 810
            .:|:||.||||||||||||||:||||.|::..||..|..||..||..:||.:|.||:.||::|||
 Frog   742 CISNTALYLRLWALSLAHAQLSEVLWGMIMRKGLNVEPSVGVFVLIPLFAVFAFLTIAILLVMEG 806

  Fly   811 LSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAI 845
            ||||||.|||||||||:|||.|.||.|.||||..|
 Frog   807 LSAFLHALRLHWVEFQNKFYTGAGYKFNPFSFKHI 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 383/849 (45%)
V_ATPase_I 28..842 CDD:279793 382/848 (45%)
atp6v0a2NP_001016223.1 NtpI 27..839 CDD:224188 384/850 (45%)
V_ATPase_I 28..838 CDD:279793 382/848 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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