DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and Vha100-3

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster


Alignment Length:928 Identity:342/928 - (36%)
Similarity:484/928 - (52%) Gaps:131/928 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRY 67
            |.||||:|.||||.|.:|.|:.|:.|:|..|.|||.::..:.......:..:|.:|.|:.|.:..
  Fly    13 SFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDS 77

  Fly    68 LEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTE----- 127
            |...|.:     |...|.......||....|....|..:.|:.::..|.|:..::..|..     
  Fly    78 LHTYIVQ-----LHVNEIFYPDVDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRNRM 137

  Fly   128 LKH--ILRK----------TQVFFDES-----VPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQ 175
            ::|  .|.|          :::.:.||     |.....:||||.:                    
  Fly   138 MEHSFALNKANKYMVSDMGSELLYSESTVIGLVQDATTTSGAYPA-------------------- 182

  Fly   176 LLGEEGVRASQPGQNLKLGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNG--- 237
                            .|.::.|.|..::..:||.:|:|.|..|:.:|.:.:.:|:.:...|   
  Fly   183 ----------------HLNYMIGCIRADKFYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKP 231

  Fly   238 DQVHKSVFIIFFQGDQLKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQD 302
            ::|.|...::......:..:|.|||..:...:|.||.:.:.|.:....:...|.::..||.:.:.
  Fly   232 ERVRKFAILMMASSTMIWPKVLKICAHYHVNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAEL 296

  Fly   303 HRHRVLVAAAKNLKNWFVKVRKIKAIYHTLNLFNL----DVTQKCLIAECWVPLLDIETIQLALR 363
            .|.::|..|.::|....|.:||...:|..:|...|    :| .:.|:||.::|..|:..:::.||
  Fly   297 MRRQILEVAGRDLFIIRVNLRKALKVYDLMNRLRLVGGVEV-PRYLLAEVYIPSSDVPEVEVILR 360

  Fly   364 RGTERSG------SSVPPILNRMQTFEN--------------------------------PPTYN 390
            ..:..||      ||....:|.|:|..|                                ||||.
  Fly   361 NASRISGGADNIDSSDEDEMNDMKTMPNTTPYPIEADFQPLEDMSAGAILLKKNRLVNHMPPTYF 425

  Fly   391 RTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRK---- 451
            |.||||:.||.||||||:|.|:|:||||||||||||||||||||||||.::.||...||.|    
  Fly   426 RLNKFTRGFQNLIDAYGMADYKELNPAPYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREI 490

  Fly   452 EKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLSYNKSTVMEN 516
            ||......::|||.||.:.|||||.||||||:|.||:||.:.:|..|:|||.|...||::||.:.
  Fly   491 EKYQINATSENEILNILYAGRYIILLMGVFSVYMGLVYNIVMAKGFNLFGSSWSCRYNETTVYDP 555

  Fly   517 KF---LQLSPKGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMSWHNH 578
            .|   |..|....|.|.|||.||||:|.|.|.:.|...|:.|||::|:.|:..|:||:.::..|.
  Fly   556 AFHVTLDSSHPHFYSGHPYPLGMDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANC 620

  Fly   579 TYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDMVLFN 643
            .....:..|:...|||::|:|.||.|:|.|:|.||:.:......||:.|||||:|||||:|:|..
  Fly   621 VLMNRKADLILVVIPQMIFMLCLFGYLVFLIFYKWMSYGGHKPAPYNAACAPSVLITFINMMLMK 685

  Fly   644 TPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQAR-----------KQANVQP 697
             .:.|.|||..||:..:..|:...|.:|...||::|..||:.:|:.|           |:...|.
  Fly   686 -KEDPVENCLDYMYPNERMIEFALVGIAFCTIPILLAGKPIYLMRRRRKMQQERERDFKRMRRQT 749

  Fly   698 IAGATSDAEAGGVSNS-GSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSL 761
            ||...|........|| .|......:|||.|:|||:||..|||||.|||||||||||||||||||
  Fly   750 IAEMRSTMRYTDDDNSETSRQKSVDNEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSL 814

  Fly   762 AHAQLAEVLWTMVLSIGLKQEGPV--GGIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVE 824
            ||.||::|||.|||:.|.....|:  |..||...|..||||||.|||:|||||||||||||||||
  Fly   815 AHDQLSDVLWHMVLTKGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVE 879

  Fly   825 FQSKFYKGQGYAFQPFSF 842
            |||||:.|.|.:|:.|:|
  Fly   880 FQSKFFGGAGESFKAFNF 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 327/902 (36%)
V_ATPase_I 28..842 CDD:279793 327/901 (36%)
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 327/901 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451294
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - P PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.700

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