DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and Atp6v0a2

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_035726.2 Gene:Atp6v0a2 / 21871 MGIID:104855 Length:856 Species:Mus musculus


Alignment Length:884 Identity:405/884 - (45%)
Similarity:563/884 - (63%) Gaps:78/884 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            ||||||||.|.|.||||||..||.|:|.|||.|||||||||.:|::||||||.||:||:|:||.|
Mouse     1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERIL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            .||.:||.:..||:.:...||.||..:.:::::...:|||.|||||.:|.|.|::|.|||.|..|
Mouse    66 VYLVQEITRADIPLPEGEASPPAPPLKHVLEMQEQLQKLEVELREVTKNKEKLRKNLLELVEYTH 130

  Fly   131 ILRKTQVFFDESV---PTVYKSSGAYSSSKYRRYPQMADNQNEDEQA-QLLGEEGVRASQPGQNL 191
            :||.|:.|...:|   ||            |..:|.:.::...|... |.||            .
Mouse   131 MLRVTKTFLKRNVEFEPT------------YEEFPALENDSLLDYSCMQRLG------------A 171

  Fly   192 KLGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKT 256
            |||||:|:|.:.|:.||||||||||:|...:..|.::..||||..|:.:...||:|.|.|:|:..
Mouse   172 KLGFVSGLIQQGRVEAFERMLWRACKGYTIVTYAELDECLEDPETGEVIKWYVFLISFWGEQIGH 236

  Fly   257 RVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVK 321
            :|||||:.:...:||.|....:|||:..|:.|||:||.|||.:|:|:..:||..||:::.:..|:
Mouse   237 KVKKICDCYHCHIYPYPNTAEERREIQEGLNTRIQDLYTVLHKTEDYLRQVLCKAAESVCSRVVQ 301

  Fly   322 VRKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENP 386
            |||:|||||.||:.:.|||.||||||.|.|.:|:..::.||..|:..||:::|..:|.:.|.|.|
Mouse   302 VRKMKAIYHMLNMCSFDVTNKCLIAEVWCPEVDLPGLRRALEEGSRESGATIPSFMNTIPTKETP 366

  Fly   387 PTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRK 451
            ||..||||||:.||.::|||||.||||:|||.:|||||||||||||||.|||.:|.||.|.::..
Mouse   367 PTLIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVLN 431

  Fly   452 EKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLS--------- 507
            |......:: .||..:||.||||:.|||:||:||||||||.||||:|:|||.|::|         
Mouse   432 ENHPRLSQS-QEILRMFFDGRYILLLMGLFSVYTGLIYNDCFSKSVNLFGSGWNVSAMYSSSHSP 495

  Fly   508 --------YNKSTVMENKFLQLSPK--GDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIF 562
                    :|.||:..::.|||.|.  |.:.| |||||:||||.:| .|::.|.|::|||:|:|.
Mouse   496 EEQRKMVLWNDSTIRHSRTLQLDPNIPGVFRG-PYPFGIDPIWNLA-TNRLTFLNSFKMKMSVIL 558

  Fly   563 GVIHMIFGVVMSWHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEA 627
            |:.||.||||:...||.:||.:.::....:|:::|:|.:|.|::.::..||:.::|...:.    
Mouse   559 GIFHMTFGVVLGIFNHLHFRKKFNVYLVSVPEILFMLCIFGYLIFMIIYKWLAYSAETSRE---- 619

  Fly   628 CAPSILITFIDMVLFNTPKPPPENCETY-MFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARK 691
             ||||||.||:|.||.|.|       |: ::.||..:|.:.|.:.|..:||:.|.|||.::....
Mouse   620 -APSILIEFINMFLFPTSK-------THGLYPGQAHVQRVLVALTVLAVPVLFLGKPLFLLWLHN 676

  Fly   692 QANV--QPIAGAT-----SDAEAGGVSNSGSHGGGGGHE--------EEEELSEIFIHQSIHTIE 741
            ..|.  ...:|.|     |:.|...:.|.....|....|        ||....||.:.|:||:||
Mouse   677 GRNCFGMSRSGYTLVRKDSEEEVSLLGNQDIEEGNSRMEEGCREVTCEEFNFGEILMTQAIHSIE 741

  Fly   742 YVLGSVSHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILV 806
            |.||.:|:|||||||||||||||||::|||.|::.:||:.:...|.::|..|.||:|:||:.||:
Mouse   742 YCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVMAFFAVLTIFILL 806

  Fly   807 LMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAI 845
            :|||||||||.:||||||||:|||.|.|..|.||||..:
Mouse   807 VMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLL 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 384/853 (45%)
V_ATPase_I 28..842 CDD:279793 383/852 (45%)
Atp6v0a2NP_035726.2 NtpI 5..839 CDD:224188 397/872 (46%)
V_ATPase_I 28..839 CDD:279793 381/849 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.820

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