DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and vha-6

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_496436.1 Gene:vha-6 / 174743 WormBaseID:WBGene00006915 Length:865 Species:Caenorhabditis elegans


Alignment Length:909 Identity:406/909 - (44%)
Similarity:548/909 - (60%) Gaps:115/909 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            |||::|||.|.|||:|.|||:||.||:||||||:.||.|||.:.||:.||||||||||||||||:
 Worm     1 MGSIYRSEHMKLCQIFFQSESAYQCVAELGELGMAQFIDLNEEQNAYTRKFVNEVRRCDEMERKI 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            .::|.||.||.:|:.|..|...||||:.|.::||..||||.||.::|:|.:.||.|.::|.|:|.
 Worm    66 NFVEDEITKDLVPIPDYDEHIPAPQPKHMGEMEANLEKLEEELVQINKNCKVLKNNHVQLLEMKA 130

  Fly   131 ILRKTQVFFDESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQLLGEEGV-------RASQPG 188
            :|.......|..    .|...|.|.|:..|                 ||.|.       ...:|.
 Worm   131 VLEHVTSLLDPH----SKREAAMSISEAAR-----------------GEAGPISFGMKDEFDKPV 174

  Fly   189 QNLK-LGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGD 252
            ::.| |.||.||:.|.:..||||.|||..|..||.:...|:...|..:| :...|.|||:||.|:
 Worm   175 KDEKELKFVTGVVKRSKAIAFERFLWRLSRAKVFAKFIQIQEQTELFSN-EFEDKCVFILFFSGE 238

  Fly   253 QLKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKN 317
            ||:.:|||||:||:|..|..||.||:|.::.:.:..:..|:..|:.:|.|:|.:.:.|||.||:.
 Worm   239 QLRAKVKKICDGFQAKCYTVPENPAERTKLLLNIKVQTTDMKAVIEKTLDYRSKCIHAAATNLRK 303

  Fly   318 WFVKVRKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQT 382
            |.:.:.|:|:|:||||:|::||||||||||||||..||..::.:|..||..|||:||.|||.|:|
 Worm   304 WGIMLLKLKSIFHTLNMFSVDVTQKCLIAECWVPEADIGQVKNSLHMGTIHSGSTVPAILNEMET 368

  Fly   383 FENPPTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLW 447
            .:.||||.:.||||:.||.::||||:|:|||:||||:|||:|||||||||||.|||.||.:....
 Worm   369 DKYPPTYFKLNKFTQGFQNIVDAYGIANYREVNPAPWTIISFPFLFAVMFGDAGHGIIMLIAASA 433

  Fly   448 MIRKEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLSYNKST 512
            .:..||.|.:.|..:||:|.||||||::.|||:|::|||.||||.:|||:|||||.|...||: |
 Worm   434 FVIFEKKLISMKIKDEIFNTFFGGRYVVLLMGMFAIYTGFIYNDFYSKSVNIFGSSWVNPYNQ-T 497

  Fly   513 VMENKFLQ---------------LSPKGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIF 562
            ::.|...|               ::...||  .|||||:||:|.:| .|::.|.|..|||.||:.
 Worm   498 LLANMDAQGADSNTDLSLTFPPEIAFNHDY--GPYPFGVDPVWNLA-INRLNFLNPMKMKTSILL 559

  Fly   563 GVIHMIFGVVMSWHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPY--- 624
            |:..|.||:::|..||...|:.:.:::.||||.:||..:|.|:.|.:.:|||.|..   ||.   
 Worm   560 GISQMAFGIMLSLMNHIGNRSVVDIVFVFIPQCLFLGCIFVYLCLQVLMKWIFFYV---KPAYIF 621

  Fly   625 -----SEACAPSILITFIDMVLF-------------------------NTPKPPPENCETYM--- 656
                 ...||||:||..|:|.:.                         |......:.|  |:   
 Worm   622 GRLYPGSNCAPSLLIGLINMFMVKSRDASFAHDVGTAAGKEWVIVNGQNVTYTINDQC--YLQQW 684

  Fly   657 FMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAGATSDAEAGGVSNSGSH---GG 718
            :..|..::::.:|:||..:|||||.||..|.....:                     |.|   |.
 Worm   685 YPNQSLVELILLLIAVVSVPVMLLVKPFYIRWRHSR---------------------GLHIDLGH 728

  Fly   719 GGGHEEEEELSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEG 783
            |.....|....:|.:||:|||||:|||.||||||||||||||||||||::|||||||.:.|...|
 Worm   729 GPDEHGEFNFGDIMVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVLRMSLTMGG 793

  Fly   784 PVGGIVLTCVFAF-WAILTVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAII 846
            ..|...:|.:|.| ::||:|.||:||||||||||.:||||||||||||.|.|..|:||.|..||
 Worm   794 WGGSAAITILFYFIFSILSVCILILMEGLSAFLHAIRLHWVEFQSKFYGGTGIQFEPFCFTKII 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 385/877 (44%)
V_ATPase_I 28..842 CDD:279793 385/876 (44%)
vha-6NP_496436.1 NtpI 28..858 CDD:224188 388/882 (44%)
V_ATPase_I 28..853 CDD:279793 385/876 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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