DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and Atp6v0a2

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_446227.2 Gene:Atp6v0a2 / 116455 RGDID:621006 Length:856 Species:Rattus norvegicus


Alignment Length:886 Identity:400/886 - (45%)
Similarity:563/886 - (63%) Gaps:82/886 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            ||||||||.|.|.||||||..||.|:|.|||.|||||||||.:|::||||||.||:||:|:||.|
  Rat     1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERIL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            .||.:||.:..||:.:...||.||..:.:::::...:|||.|||||.:|.|.|::|.|||.|..|
  Rat    66 VYLVQEITRADIPLPEGEASPPAPPVKHVLEMQEQLQKLEVELREVTKNKEKLRKNLLELVEYTH 130

  Fly   131 ILRKTQVFFDESV---PTVYKSSGAYSSSKYRRYPQM-ADNQNEDEQAQLLGEEGVRASQPGQNL 191
            :||.|:.|...:|   ||            |..:|.: :|:..:....|.||            .
  Rat   131 MLRVTKTFLKRNVEFEPT------------YEEFPALESDSLLDYSCMQRLG------------A 171

  Fly   192 KLGFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKT 256
            |||||:|:|.:.::.||||||||||:|...:..|.::..||||..|:.:...||:|.|.|:|:..
  Rat   172 KLGFVSGLIQQGKVEAFERMLWRACKGYTIVTYAELDEALEDPETGEVIKWYVFLISFWGEQIGH 236

  Fly   257 RVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVK 321
            :|||||:.:...:||.|....:|||:..|:.|||:||.|||.:|:|:..:||..||:::.:..::
  Rat   237 KVKKICDCYHCHIYPYPNTAEERREIQEGLNTRIQDLYTVLHKTEDYLRQVLCKAAESVCSRVIQ 301

  Fly   322 VRKIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENP 386
            |||:|||||.||:.:.|||.||||||.|.|.:|:..::.||..|:..||:::|..:|.:.|.|.|
  Rat   302 VRKMKAIYHMLNMCSFDVTNKCLIAEVWCPEVDLPGLRRALEEGSRESGATIPSFMNTIPTKETP 366

  Fly   387 PTYNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRK 451
            ||..||||||:.||.::|||||.||||:|||.:|||||||||.|||||||||.:|.||.|.::..
  Rat   367 PTLIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITFPFLFGVMFGDLGHGFVMFLFALLLVLN 431

  Fly   452 EKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLS--------- 507
            |......:: .||..:||.||||:.|||:||:||||||||.||||||:|||.|::|         
  Rat   432 ENHPRLSQS-QEILRMFFDGRYILLLMGLFSVYTGLIYNDCFSKSLNLFGSGWNVSAMYSSSHSP 495

  Fly   508 --------YNKSTVMENKFLQLSPK--GDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIF 562
                    :|.||:..::.|||.|.  |.:.| |||||:||||.:| .|::.|.|::|||:|:|.
  Rat   496 EEQRKMVLWNDSTIRHSRTLQLDPNIPGVFRG-PYPFGIDPIWNLA-TNRLTFLNSFKMKMSVIL 558

  Fly   563 GVIHMIFGVVMSWHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEA 627
            |:.||.|||::...||.:||.:.::....:|:::|:|.:|.|::.::..||:.::|...:.    
  Rat   559 GIFHMTFGVILGIFNHLHFRKKFNIYLVSVPEILFMLCIFGYLIFMIIYKWLAYSAETSRE---- 619

  Fly   628 CAPSILITFIDMVLFNTPKPPPENCETY-MFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIM---- 687
             ||||||.||:|.||       .:.||: ::.||..:|.:.:.:.|..:||:.|.|||.::    
  Rat   620 -APSILIEFINMFLF-------PSSETHGLYPGQAHVQKVLLALTVLAVPVLFLGKPLFLLWLHN 676

  Fly   688 -------------QARKQANVQPIAGATSDAEAGGVSNSGSHGGGGGHEEEEELSEIFIHQSIHT 739
                         ..||.:..:.....:.|.|.|  :|....|......||....||.:.|:||:
  Rat   677 GRSCFGVSRSGYTLVRKDSEEEVSLLGSQDIEEG--NNRMEEGCREMTCEEFNFGEILMTQAIHS 739

  Fly   740 IEYVLGSVSHTASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGI 804
            |||.||.:|:|||||||||||||||||::|||.|::.:||:.:...|.::|..|..|:|:|||.|
  Rat   740 IEYCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMRVGLRVDNTYGVLLLLPVMTFFAVLTVFI 804

  Fly   805 LVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAI 845
            |::|||||||||.:||||||||:|||.|.|..|.||||..:
  Rat   805 LLVMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLL 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 379/855 (44%)
V_ATPase_I 28..842 CDD:279793 378/854 (44%)
Atp6v0a2NP_446227.2 NtpI 5..839 CDD:224188 392/874 (45%)
V_ATPase_I 28..839 CDD:279793 376/851 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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