DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-1 and si:ch73-173p19.2

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_021326052.1 Gene:si:ch73-173p19.2 / 100332691 ZFINID:ZDB-GENE-141212-282 Length:831 Species:Danio rerio


Alignment Length:860 Identity:423/860 - (49%)
Similarity:590/860 - (68%) Gaps:46/860 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            |..|||||||.|.|||||:|:|:.|::|||.||||||:||||...||||:||.||::|::|||.|
Zfish     2 MSCLFRSEEMCLVQLFLQTESAHNCINELGHLGLVQFKDLNPCATAFQRRFVKEVKKCEQMERIL 66

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            ||||||:.|..|.:..|.|....|..|::::||:||||||.||||:|.|.:.|::|.:||.::..
Zfish    67 RYLEKEMVKSNIVITATKEKEMVPCARDVLELESTFEKLEQELREINHNHDTLRQNLIELMDIDS 131

  Fly   131 ILRKTQVFFDESVPTV-YKSSGAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKLG 194
            :||.|:.||:|:...: :..:.:|.|........:...:|.             :|.....|.||
Zfish   132 LLRMTEDFFEEAESLLTFSEASSYDSVSMTISSFITSRRNS-------------SSSTSGPLHLG 183

  Fly   195 FVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVK 259
            |:||||.:||.||||::|||...||..||.|.|:|..|.......|.|..||||.|||.::.:::
Zfish   184 FIAGVIKQERFPAFEKVLWRLFHGNFVLRHAEIQTTEELEAVRGAVKKDAFIIFVQGDHVREKIR 248

  Fly   260 KICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVRK 324
            |:||||||:||.||:...:|:||:..:|||:|||..||.:|:::|..||..||::::.|..||:|
Zfish   249 KVCEGFRASLYSCPKTLYERKEMSNSIMTRMEDLRLVLRRTEEYRAGVLSRAAEHVQEWGSKVKK 313

  Fly   325 IKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPTY 389
            :||||:||||.|:|:|||.::||.|.|:.|:..:|.||.:|:|:|||||.|:|||:||.:.|||:
Zfish   314 MKAIYYTLNLCNIDITQKLIVAEIWCPVSDLTVVQNALIKGSEQSGSSVTPVLNRIQTKQTPPTF 378

  Fly   390 NRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKEKG 454
            ||||.||:.|||:||||||.:|:|:||||||||||||||||||||.|||.:||||.:|:|.:...
Zfish   379 NRTNSFTEGFQAIIDAYGVGTYQEINPAPYTIITFPFLFAVMFGDCGHGLLMALFSVWLITQADY 443

  Fly   455 LAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHW--------HLSYNKS 511
            :  :|..||:.::..|||:||.|||:||:||||||||.||||.|||||.|        |.|:...
Zfish   444 I--RKWKNELTDVLVGGRFIILLMGLFSIYTGLIYNDCFSKSFNIFGSSWCVRPMFHPHGSWQNE 506

  Fly   512 TVMENKFLQLSP--KGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMS 574
            |:.::..|||:|  .|.:.|.||.||:||||.:| :||:.|.|::|||:|:|.||.||:|||.:|
Zfish   507 TLHDHHHLQLNPFVPGVFSGHPYVFGIDPIWNIA-SNKLSFLNSFKMKMSVILGVAHMLFGVTLS 570

  Fly   575 WHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDM 639
            ..|..:||....:|.:|:|||||:|.||.|::.|:..||       ....|...|||||:.||.|
Zfish   571 LVNFLHFRKFQDILLQFVPQLVFMLCLFGYLIFLILYKW-------SVSLSSEMAPSILLLFISM 628

  Fly   640 VLFNTPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAGATSD 704
            :||:.   .|::  ..::.||..:|:..|:.||..:||:||.||.||.::|.:...|....:..|
Zfish   629 MLFDY---QPDH--KLLYGGQKAVQICLVVTAVLMVPVLLLVKPFLIYRSRMKTRHQVFGNSLDD 688

  Fly   705 AEAGGVSNSGSHGGGGGHEEEEELS--EIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAHAQLA 767
            .:.....:|.:.     |:::|.:|  ::|::|:||||||.||.:|:|||||||||||||||:|:
Zfish   689 QQCTDKRSSFAR-----HQKDETVSMGDVFVYQAIHTIEYCLGCISNTASYLRLWALSLAHAELS 748

  Fly   768 EVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVEFQSKFYKG 832
            ||||.|||..|||....:|.::|..:||.:|:|||.:|::|||||||||.|||||||||:|||:|
Zfish   749 EVLWRMVLQAGLKLSFGLGSLMLALLFAAFAVLTVTVLLVMEGLSAFLHALRLHWVEFQNKFYEG 813

  Fly   833 QGYAFQPFSFDAIIE 847
            .||.|.|.|||::::
Zfish   814 SGYKFTPLSFDSLLK 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 403/827 (49%)
V_ATPase_I 28..842 CDD:279793 403/826 (49%)
si:ch73-173p19.2XP_021326052.1 V_ATPase_I 28..823 CDD:307581 403/827 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

Return to query results.
Submit another query.