DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-1 and atp6v0a4

DIOPT Version :9

Sequence 1:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001107162.1 Gene:atp6v0a4 / 100135019 XenbaseID:XB-GENE-493197 Length:846 Species:Xenopus tropicalis


Alignment Length:874 Identity:470/874 - (53%)
Similarity:604/874 - (69%) Gaps:60/874 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
            |.||||||||:|.||.||.||.|.|::||||||||||||||..||:|||:||||||||:.|||.|
 Frog     1 MASLFRSEEMSLTQLILQVEAGYCCIAELGELGLVQFRDLNASVNSFQRRFVNEVRRCENMERIL 65

  Fly    66 RYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKH 130
            |:||.|:..|.|.:....:.|:.|.||||||||...||||.||:|||:|.:|||:||||||||||
 Frog    66 RFLESEMVNDKIKIRTPEKLPQTPLPREMIDLETVLEKLEGELQEVNRNQQALKQNFLELTELKH 130

  Fly   131 ILRKTQVFF--DESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKL 193
            :|:|||.||  :.::|..:.|....|..:.|..|.                    |:..|   ||
 Frog   131 LLKKTQDFFEAEANLPDDFFSEDTSSLLELRTIPS--------------------AAAAG---KL 172

  Fly   194 GFVAGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRV 258
            ||.||||.|||:..|||:|||.||||::|:...::|.||||...::|.|:|||||:||||||.::
 Frog   173 GFTAGVINRERMATFERLLWRVCRGNIYLKYTELDTALEDPVTKEEVKKNVFIIFYQGDQLKLKI 237

  Fly   259 KKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVR 323
            ||||:||:||:|||||:..:|:||...|.|||||||||:.||:.||.|||:.||::|.:|.:||:
 Frog   238 KKICDGFKATVYPCPESATERKEMVADVNTRIEDLNTVITQTESHRQRVLLEAAQSLCSWGIKVK 302

  Fly   324 KIKAIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPT 388
            |:||:||.|||.|:||||:|:|||.|.|:.|.|.|:.||.||.|||||::.|||..:.:..:|||
 Frog   303 KMKAVYHVLNLCNIDVTQQCVIAEIWCPIADKEQIKQALHRGMERSGSTIAPILTNISSKLDPPT 367

  Fly   389 YNRTNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKEK 453
            :|||||||..||.:::||||.|||||||.|||||||||||||||||.|||::|..|.|||:..||
 Frog   368 FNRTNKFTSGFQNIVNAYGVGSYREMNPTPYTIITFPFLFAVMFGDCGHGSVMLGFALWMVLNEK 432

  Fly   454 GLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHL-------SYNKS 511
            .|.|.||||||||.||||||:|.||.:||:|||.||||.||||.:||||.|.:       ::|.:
 Frog   433 QLLASKTDNEIWNTFFGGRYLILLMSIFSIYTGFIYNDCFSKSFDIFGSSWRVRPMFINKTWNDN 497

  Fly   512 TVMENKFLQLSP--KGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMS 574
            .|.:...|||.|  .|.|.|.|||||:||||.:| .||:.|.|:||||:|::.|:..|:|||::.
 Frog   498 LVHQGLQLQLDPAVPGVYSGNPYPFGIDPIWNIA-QNKLTFLNSYKMKMSVVMGITQMVFGVMLG 561

  Fly   575 WHNHTYFRNRISLLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDM 639
            ..||..|:..|:::.:|:|:::|::.||.|:|.::..||.|:..     :|...||||||.||:|
 Frog   562 LLNHINFKRPINIILQFVPEMIFIICLFGYLVFMIIFKWCKYDV-----HSSQGAPSILIHFINM 621

  Fly   640 VLFNTPKPPPENCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIM--QARKQANVQPIAGAT 702
            .|||  ...|.|...|..  |..:|...|:.|:..:|.|||.||.::.  ..:.|..:|..:|..
 Frog   622 FLFN--YSDPTNAPLYEH--QKEVQTFLVIFALIAVPWMLLIKPFVLRANHLKAQRMLQSSSGPE 682

  Fly   703 SDAEAGGVSNS-------------GSHGGG-GGHEEEEELSEIFIHQSIHTIEYVLGSVSHTASY 753
            ..||...|.|:             |.|||| |.|.||.:..:||:||:||||||.||.:|:||||
 Frog   683 DHAELTDVENAHANHKSKKEEHGGGDHGGGHGEHGEEFDFGDIFVHQAIHTIEYCLGCISNTASY 747

  Fly   754 LRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLSAFLHTL 818
            |||||||||||||:|||||||:..||...|..|.|.:..:||.:|:|||.||::|||||||||.|
 Frog   748 LRLWALSLAHAQLSEVLWTMVMHQGLSIGGYGGLIGVFIIFAAFAVLTVAILLVMEGLSAFLHAL 812

  Fly   819 RLHWVEFQSKFYKGQGYAFQPFSFDAIIE 847
            ||||||||:|||.|.|:.|.||||.:|:|
 Frog   813 RLHWVEFQNKFYAGTGHLFSPFSFQSILE 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 448/841 (53%)
V_ATPase_I 28..842 CDD:279793 448/840 (53%)
atp6v0a4NP_001107162.1 NtpI 26..838 CDD:224188 450/844 (53%)
V_ATPase_I 28..836 CDD:279793 448/840 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 936 1.000 Domainoid score I43
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 984 1.000 Inparanoid score I310
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - otm48785
Panther 1 1.100 - - O PTHR11629
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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