DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and PNS1

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_014804.3 Gene:PNS1 / 854332 SGDID:S000005687 Length:539 Species:Saccharomyces cerevisiae


Alignment Length:517 Identity:98/517 - (18%)
Similarity:185/517 - (35%) Gaps:148/517 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 YNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWLSAPILWFSIFGVLIGLLVG 347
            |:|.|...|        ..|:..:::..|...||.|::.:.|.|......::   .|::|.|:..
Yeast   117 YDGVNTGTL--------NTNAAILLVFVCIIALVFSVLGLTLCRIFPKQFIY---CGMVINLVAS 170

  Fly   348 I-----YFSVKQYIHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVGVCFVVILLLVI--- 404
            :     |.|::   :|.                                .|:.|:|...:..   
Yeast   171 LGTAIMYMSLR---YWS--------------------------------AGIVFLVFTFMTAWCY 200

  Fly   405 -VLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAF---AIGVGLYLGSIGDPSFRM 465
             .:|.||.:::|:.|....|:.. ...:||..|...|..:|..|   |:.|..|:..  ||:   
Yeast   201 WGMRSRIPLSVAVLKVVVDAMKK-CPQIFFVSFVGALVASAFGFLFSAVIVATYIKY--DPN--- 259

  Fly   466 VRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRNPCLNTTCSFDSINN 530
                :.:|.       |:      ..||||.   ..:...|.:..||          |.:     
Yeast   260 ----SSNGG-------CD------VSGGSCS---HSKLIGVLVVVFF----------CGY----- 289

  Fly   531 PIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKK-RDVPYFTLTRAFFQTAVYHLG 594
                            ::|..|....:.|::..|..||:..|. :.:|.:....|..:...|..|
Yeast   290 ----------------YISEVIRNVIHCVISGVFGSWYYMSKSDQGMPRWPAFGALKRAMTYSFG 338

  Fly   595 TVAFGSLILAIVRLIRLVLEYI-HEKLKKYDNAVTRAILCCMRCFFWLLETFLKFL----NRNAY 654
            ::.||||::|::.|:|.:|:.| |:........:  ||......|.|:: .|||:|    |..||
Yeast   339 SICFGSLLVALIDLLRQILQMIRHDVTSSGGGQI--AIQILFMVFDWII-GFLKWLAEYFNHYAY 400

  Fly   655 IMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTYYFL------- 712
            ...|::||.:..:|.:::.::....:..:..|.:.:....|..:..:......|:.:|       
Yeast   401 SFIALYGKPYLRAAKETWYMLREKGMDALINDNLINIALGLFSMFASYMTALFTFLYLRFTSPQY 465

  Fly   713 DNNPS----------IIRLNYIAVPTTVV--VIAAFLIT-----SVFFGVYSTAVDTLFLCF 757
            ::|.:          :|.|....:.|..:  ..|.|.:.     .||...|....|.:|..:
Yeast   466 NSNGAYNGALMAFSFVIALQICNIATEAIRSGTATFFVALGNDPEVFHHSYPHRFDEIFRAY 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 78/384 (20%)
PNS1NP_014804.3 Choline_transpo 187..510 CDD:398290 75/382 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3684
OMA 1 1.010 - - QHG53694
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2467
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.800

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