DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and AT1G25500

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_173921.1 Gene:AT1G25500 / 839136 AraportID:AT1G25500 Length:488 Species:Arabidopsis thaliana


Alignment Length:163 Identity:37/163 - (22%)
Similarity:58/163 - (35%) Gaps:48/163 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NFNPFYVTIAVCTVLGVFIF-----------------VLNIVCGCCSKHKQYWQDRHTGNRWLVS 70
            |.:.|::..:|..|:. |::                 :.:.|....:|| .||.....|:.::||
plant   214 NAHVFFIPFSVAKVIH-FVYKPITSVEGFSRARLHRLIEDYVDVVATKH-PYWNRSQGGDHFMVS 276

  Fly    71 FWSATP---HKQPPL------DLTELKDASHFQPVNPDVERPVEYTVQHHRPQYQYPPS-RGASP 125
            .....|   ...|.|      .|.....:..|:| |.||..|..|.     |:.:..|| .|.||
plant   277 CHDWAPDVIDGNPKLFEKFIRGLCNANTSEGFRP-NVDVSIPEIYL-----PKGKLGPSFLGKSP 335

  Fly   126 Q---------GYHHHHQQ----QHHREEYVELQ 145
            :         |..|...:    ||.:|...|:|
plant   336 RVRSILAFFAGRSHGEIRKILFQHWKEMDNEVQ 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337
AT1G25500NP_173921.1 Choline_transpo 157..452 CDD:461337 37/163 (23%)
Blue background indicates that the domain is not in the aligned region.

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