DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and AT5G13760

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_196880.2 Gene:AT5G13760 / 831221 AraportID:AT5G13760 Length:569 Species:Arabidopsis thaliana


Alignment Length:535 Identity:107/535 - (20%)
Similarity:180/535 - (33%) Gaps:179/535 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 TPTVPVHGLNLHS-------TVKNVLQNQNTWLYLSIFVGVCFVVILLLVI-------------- 404
            ||..|    |.|.       |.:..|.:.|:..|.:.|..:.|:...::.|              
plant   110 TPPPP----NQHQTRSIFTPTPQQTLASLNSTKYTNKFFLLLFIFHKVVAIGFVGFLVFRGVQGL 170

  Fly   405 ------VLRKRIRIAIALTK--EGSKAVSSVI---------------------STVFFPIFSWIL 440
                  |.||..:|...|..  |.:..:|.::                     ||....:.|.||
plant   171 IGSNGSVKRKEKKILRFLLPQVEAASLLSIILAFLWQMAFRIWPDFMIHFILWSTFLMSLSSGIL 235

  Fly   441 F------------IAAIAFAIGVGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGG 493
            .            :..|||:||.|||       :..:.|::                        
plant   236 LLCFQMPATDAVGVCLIAFSIGNGLY-------ACWVTRRI------------------------ 269

  Fly   494 SCKPEVFQQYCSVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISA---- 554
                    ::||..|..       .|.....|..:|.|     ..:....||||:|.:|..    
plant   270 --------KFCSKILVK-------SLEPVSKFSDLNLP-----TYYMLAAGFLWMSMWIFGVIGA 314

  Fly   555 ----FSYMVLASTFARWYWTFK-KRDVPYFTL---------------TRAFFQTAV-YHLGTVAF 598
                |..:|:........||.: .|::...|:               ||..||.|: .:||:...
plant   315 LNFYFPPLVIIGLVLSLAWTTEVMRNIVNLTVSRVIALYYLRGMQSSTRFSFQRALSRNLGSACL 379

  Fly   599 GSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLNRNAYIMCAIHGKN 663
            |||.:..:..:|::...:: .||..|    ..:.||..|...|::...:..|..|::..|.:||.
plant   380 GSLFVPTIEALRILARGLN-LLKGED----EFMFCCANCCLRLMDFIFEHGNGWAFVQIAAYGKG 439

  Fly   664 FCSSAADSFNLIM-RNFLRVVTLDQVTDFLFFLSKL------LLTAGAGASTYYFLDNNPSIIRL 721
            |..::.|::.|.. .:.:.:|..| :|..:.||:.:      |:.|.|...|.|    .|     
plant   440 FVRASQDTWKLFEDEDMVEIVDAD-ITSSICFLTGICSGCVCLIVAAAWTHTVY----KP----- 494

  Fly   722 NYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPEKPFFMSK-----QLMKI 781
             :.|..:.:.....:|:|.:...:....|...:.|:.|       :||..||..|     |.|..
plant   495 -FTATISLLAFFIGYLMTRISMALPHACVGCYYTCYAE-------NPESRFFEDKVIKTRQDMIK 551

  Fly   782 LGK--KNNLPPRQRR 794
            .|:  ..:..||.||
plant   552 SGRVAVTSTTPRVRR 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 82/421 (19%)
AT5G13760NP_196880.2 Choline_transpo 249..534 CDD:461337 71/358 (20%)

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