DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and AT4G38640

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_568045.1 Gene:AT4G38640 / 830020 AraportID:AT4G38640 Length:556 Species:Arabidopsis thaliana


Alignment Length:493 Identity:95/493 - (19%)
Similarity:186/493 - (37%) Gaps:131/493 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 EDLVNSWSIVLVA------CFCTLVASLIYIALMRWLSAPILWFSIFGVLIGLLVGIYFSVKQYI 356
            :||:  |::|:..      ||..|:....|...:.:...|:.          :|..|:|:|..::
plant   140 KDLI--WTLVVTLILSVPFCFSVLLLLKHYTKQIVYACLPLF----------VLFPIFFNVYWFV 192

  Fly   357 HWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVGVCFVVILLLVIVLRKRIRIAIALTKEGS 421
                       ...|.|:..:.|......|.| :||.:...:|:.:::....||.:.|.:....|
plant   193 -----------ACTLSSSCSDALPLAYRILVL-VFVFLIIGIIVWIIVANWHRIDLTIQIISVAS 245

  Fly   422 KAVSSVISTVFFPIFSWILFIAAIAFAIGVGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPA 486
            .|:|..:.          ||:......:|:.:|.                            .|.
plant   246 DALSKNLK----------LFVVLPLLTLGLVVYY----------------------------API 272

  Fly   487 INYTV----GGSCKPEVF--QQYCSVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGF 545
            :.:.|    .|...|...  |.:|..:                         |..|...|.....
plant   273 VVFLVFARFNGKFVPRELDGQYFCEWK-------------------------EDSWVPAYYALAI 312

  Fly   546 LWLSFFISAFSYM---VLASTFARWYWTFKKRD-VP----YFTLTRAFFQTAVYHLGTVAFGSLI 602
            |.:.:.::....|   |::...|:||  |.|.| :|    ..:|..||.|:    .||:....|:
plant   313 LTMIWSLAVMVEMQVYVISGAIAQWY--FSKEDSIPKKCIRSSLRNAFGQS----FGTICVSGLL 371

  Fly   603 LAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLNRNAYIMCAIHGKNFCSS 667
            :.|||::|.:::...|  :.....|...:.||.......|:    :||:......||.|:.:|:|
plant   372 ICIVRVVRAIVDNARE--ENTQGIVNMVLRCCANALLGALD----YLNKFTINFAAITGEAYCTS 430

  Fly   668 AADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTYYFLDNNPSIIR-LNYIAVPTTVV 731
            |..::.|:.||.|..|.::.|:..:......:|:|....:|:       :::| ::.:.:.:.||
plant   431 AKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAYAVATW-------AVLRGVSNLGIDSYVV 488

  Fly   732 VIAAF----LITSVFFGVYSTAVDTLFLCFLEDCERND 765
            .:.|:    :|.:.|..|....:||:::|:..|.::.|
plant   489 AVLAWVLLIVILAFFVHVLDDVIDTIYVCYAIDRDKGD 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 72/372 (19%)
AT4G38640NP_568045.1 Choline_transpo 229..523 CDD:367975 73/375 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53694
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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