DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and AT3G03700

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_187020.1 Gene:AT3G03700 / 821183 AraportID:AT3G03700 Length:482 Species:Arabidopsis thaliana


Alignment Length:451 Identity:94/451 - (20%)
Similarity:164/451 - (36%) Gaps:116/451 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 LYLSIFVGVCF---VVILLLVIVLRKRIRIAIA-----LTK-----EGSKAVSSVISTVFFPIFS 437
            |:.::|.|:.|   .:|.||||||..|..|:.:     |.|     ..|.|||.:.|      .:
plant    52 LFRTLFKGLLFSQLTLISLLVIVLTIRGLISASTHHFHLKKWYPPLLASVAVSGIAS------LA 110

  Fly   438 W-ILFIAAIAFAIGVGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVF- 500
            | .:||...:.|:....:|..|          ||.|..:.   .|..|.|::..:|.     || 
plant   111 WQCIFIYNPSRAVKATFWLSPI----------LTCSVGIL---LVLIGSAVDAGIGA-----VFV 157

  Fly   501 -----QQYCSVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVF--GFLWLS--------- 549
                 |......:|...:..:..|:...:|........:..:|..:|.  |||...         
plant   158 LFAITQSLYGCWITPRLEYTDKILSLATAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRT 222

  Fly   550 ----FFISAFSYMVLASTFARWYWTFKK-RDVPYFTLTRA---------------FFQTAVYHL- 593
                .|||     |:..:.|   ||.:. ::|....::||               .|:..:.|| 
plant   223 NLDILFIS-----VIIISLA---WTMQVIKNVQQVAISRARYVNFAHGEDMDAWNAFRITMKHLT 279

  Fly   594 GTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLNRNAYIMCA 658
            |::..||.::.|:..||..:..::......|..:...    ..||..:....:...||..::...
plant   280 GSICVGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSG----ADCFSTIANKLITLGNRWGFVHVG 340

  Fly   659 IHGKNFCSSAADSFNLIMRNFLRVVTLDQ-----VTDFLFFLSKL------LLTAGAGASTYYFL 712
            .:.|.|..:::|::    :.|.....|::     :|....|||.:      .||||     .:.|
plant   341 TYDKGFMEASSDTW----KKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAVSSLTAG-----IWML 396

  Fly   713 DNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCE--RNDGS-PEK 770
                 :|..:|....|....|..:.:..|........|...::.:.||.:  |.||: |::
plant   397 -----LIHKDYALEVTLYAFIIGYFVGRVGLAWLQACVLAYYVAYSEDPQSMRFDGTIPQR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 79/414 (19%)
AT3G03700NP_187020.1 Choline_transpo <226..441 CDD:461337 46/240 (19%)

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