DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctl2 and slc44a5b

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_068079072.1 Gene:slc44a5b / 558142 ZFINID:ZDB-GENE-081105-4 Length:749 Species:Danio rerio


Alignment Length:812 Identity:271/812 - (33%)
Similarity:409/812 - (50%) Gaps:114/812 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCG- 75
            |||.::|..|.||..: |.||||.|.::||:.:.|:..:...|..:||..|::.||||:.:.|| 
Zfish    14 GEPHKFDPTFRGPVHK-RGCTDVLCCVIFVIVILGYIVLGTVAWMHGDPRKVVYPTDSYGQFCGQ 77

  Fly    76 MDSGVLNKKNLFFFDLNQCIDPLVPIT-GCDTPQVCVETCPRE--TFV---WDTMKDKQSFAELH 134
            .::...||..||:|::.||.:|.|.|. .|.|.|:||..||..  |::   :...::|.|:    
Zfish    78 QETPNANKAILFYFNILQCANPSVLINLQCPTTQLCVSKCPDRFATYIDMQYSYRRNKGSW---- 138

  Fly   135 SRLICLSEEHKAQI------RTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFL 193
                    |:..|.      .....|...:....|....:.|.|||:||           .|.|:
Zfish   139 --------EYYKQFCKPGFNNPDKPISQVLRDEDCPSMIVPSRPFLQRC-----------FPDFI 184

  Fly   194 LNGGRSRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGK-QTPVDEEPIIQCKRRLNE 257
            ...|                          .:|.|........:|| ::.||.....:.:|.:..
Zfish   185 TRNG--------------------------TLTVANQTSFKDGHGKIRSVVDLRDAAKQERTVLS 223

  Fly   258 AVIKEKMMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYI 322
            ..:......|::.:..|:            ||:.:|.||.||..:||..:|:....:::.||::|
Zfish   224 GKVTAMQQGTESGITSLL------------DAKEVGTKIFEDYASSWFWILIGLVISMLVSLVFI 276

  Fly   323 ALMRWLSAPILWFSIFGVLIGLLVGIYFSVKQYIHWENTP--TVPVHGLNLHSTVKNVLQNQNTW 385
            .|:|:.:..:.|..||||:..:..||:....:|...:..|  .|.:..:...:..:..||...||
Zfish   277 LLLRFTAGVLFWLVIFGVIAAVGYGIWHCYWEYSSLKGKPDSDVTISDIGFQTDFRVYLQLSQTW 341

  Fly   386 LYLSIFVGVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIG 450
            |.....:.|...:|:|::|.||.|:||||||.||||||:..::||:|:||.:::|....||:...
Zfish   342 LIFMTSLAVIEAIIILVLIFLRNRVRIAIALLKEGSKAIGCIMSTLFYPIITFLLLALCIAYWAV 406

  Fly   451 VGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNR 515
            ..::|.|.|:..::::.        |..||       .|| ..:|.||.|.|....:|       
Zfish   407 TAVFLASSGEAVYKVMS--------TLPDC-------KYT-NLTCDPETFSQSNVTKL------- 448

  Fly   516 NPCLNTTCSFDSINNPIEIKWAIFY----NVFGFLWLSFFISAFSYMVLASTFARWYWTFKK-RD 575
              |..:.|:|............||.    |:..||||..|..|.....||..||.:||..:| .|
Zfish   449 --CPGSQCTFAFYGGESLYHRYIFVLQLCNLLVFLWLVNFTIALGQCTLAGAFAAYYWALRKPAD 511

  Fly   576 VPYFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFW 640
            :|...|..:|.:...||.|::|||:|||:||:.||::|||:..|||...||.||.:|||::|.||
Zfish   512 IPPCPLASSFGRALRYHTGSLAFGALILSIVQFIRIILEYLDHKLKGAHNAFTRFLLCCLKCCFW 576

  Fly   641 LLETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAG 705
            .||.|:||:|||||||.:|:|||||:||.|:|.|:|||.:||..||:|||||.||.|||::...|
Zfish   577 CLEHFIKFMNRNAYIMISIYGKNFCTSARDAFFLLMRNVMRVAVLDKVTDFLLFLGKLLISGSVG 641

  Fly   706 ASTYYFLDNNPSIIR-----LNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERND 765
            ...::|......:|:     |||..||...|:..:::|...||.||:..|||||||||.|.|:||
Zfish   642 VLAFFFFTRQIPVIQEEVPSLNYYWVPLLTVIFGSYMIAHGFFNVYAMCVDTLFLCFLLDLEKND 706

  Fly   766 GSPEKPFFMSKQLMKILGKKNNLPPRQ-RRGK 796
            ||..:|::|...|..||.|||...|:: :||:
Zfish   707 GSATRPYYMCSSLRAILNKKNQKRPKETKRGR 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 152/364 (42%)
slc44a5bXP_068079072.1 Choline_transpo 348..703 CDD:461337 157/379 (41%)

Return to query results.
Submit another query.