DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and slc44a2

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_005165806.2 Gene:slc44a2 / 324345 ZFINID:ZDB-GENE-030131-3065 Length:847 Species:Danio rerio


Alignment Length:799 Identity:281/799 - (35%)
Similarity:404/799 - (50%) Gaps:123/799 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NKYGEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRK 73
            :|||||.::|..|.||.. :|.|||:.|.:||:|.|.|:..:...|...||..|::.||||..:.
Zfish    10 SKYGEPRKFDPTFKGPIY-NRGCTDILCCILFILALLGYFAVGILAWSQGDPRKVIYPTDSTGQF 73

  Fly    74 CGMDSGVLNKKN-LFFFDLNQCIDPLVPIT-GCDTPQVCVETCPRE--TFV--WDTMKDKQSFAE 132
            ||.....|.||. ||:|::.:|..|||.:. .|.|.|:|||.||.:  |.|  ..:..||..:.:
Zfish    74 CGQAGTPLEKKPLLFYFNIMKCASPLVLLEFQCPTTQICVEKCPDKFMTLVNALKSQSDKTYYTQ 138

  Fly   133 LHSRLICLSEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSF-LLNG 196
                 .|     |..:....:....:::..|......|..|.:|||           |:. .:.|
Zfish   139 -----FC-----KEGVDMTKNAPQILSEGLCPSILFPSKNFTRRCL-----------PALETMKG 182

  Fly   197 GRSRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIK 261
            |                                  ||...|..|..||:..:|.....||.|   
Zfish   183 G----------------------------------VVVIGNETQFTVDQGEVINATDLLNAA--- 210

  Fly   262 EKMMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMR 326
            :|            .|:|.       :|:.:..:|.||...||..:|:.....::.|||:|.|:|
Zfish   211 KK------------SNVVV-------EARAVAMRIFEDYTQSWHWILLGLVIAMLISLIFILLLR 256

  Fly   327 WLSAPILWFSIFGVLIGLLVGIYFSVKQY--IHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLS 389
            :|:..::|..|..|:|.:..||:....||  :..:....|.:..|.|.:.....||.|.|||...
Zfish   257 FLAGVMVWVMIIMVIIVIGYGIFHCYMQYASLKGQAGSDVTIKDLGLQTDFSVYLQIQQTWLAFM 321

  Fly   390 IFVGVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIGVGLY 454
            |.:.:...|||||:|.||||:.|||||.||.|||:..|:|::|:|:.::.|....||:.....::
Zfish   322 IILCIVEAVILLLLIFLRKRLLIAIALIKEASKAIGHVMSSLFYPLLTYALMSLVIAYWAITAVF 386

  Fly   455 LGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRNPCL 519
            |.:..:|.:::         ..|.:|       :|: ..:|.|..|.   :..:|:      .|.
Zfish   387 LSTSNEPIYKV---------FNTSNC-------SYS-RATCNPATFN---TSNVTT------ECP 425

  Fly   520 NTTCSFDSI-NNPIEIKWAI---FYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKK-RDVPYF 579
            :..|.|... ...:..||.|   |||:|.|.|...|:.|...:.||..||.:||.||| .|:|.|
Zfish   426 DAECLFAFYGGETLYHKWLIVFQFYNLFLFFWCVNFVIALGQVTLAGAFASYYWAFKKPDDMPAF 490

  Fly   580 TLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLET 644
            .:..:..:...||.||:||||||||||::||:||||:.:|||...|...:.:|.|::|.||.||.
Zfish   491 PIFNSLGRALRYHTGTLAFGSLILAIVQVIRVVLEYLDQKLKGAQNKFAKFLLSCLKCCFWCLEK 555

  Fly   645 FLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTY 709
            |:||:|||||||.||:|||||:||.|:|.|:|||.:||..||:|||||.||.|||:....|..::
Zfish   556 FIKFINRNAYIMVAIYGKNFCTSARDAFFLLMRNIVRVAVLDKVTDFLLFLGKLLIVGIVGICSF 620

  Fly   710 YFLDNNPSIIR-----LNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPE 769
            :|......|.:     |||..||...||..|:||...||.||:..||||||||.||.||||||.:
Zfish   621 FFFTGKIKIAQDVTPALNYYWVPILTVVFGAYLIAHGFFSVYAMCVDTLFLCFCEDLERNDGSSD 685

  Fly   770 KPFFMSKQLMKILGKKNNL 788
            ||||||.:|.:||..:.::
Zfish   686 KPFFMSPELHQILSIEKSI 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 151/363 (42%)
slc44a2XP_005165806.2 Choline_transpo 322..677 CDD:309592 159/380 (42%)
DnaJ <636..>814 CDD:333066 39/69 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 281 1.000 Domainoid score I1629
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 458 1.000 Inparanoid score I1547
OMA 1 1.010 - - QHG53694
OrthoDB 1 1.010 - - D156581at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm24498
orthoMCL 1 0.900 - - OOG6_100798
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2467
SonicParanoid 1 1.000 - - X515
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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