DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and Slc44a5

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_006501551.1 Gene:Slc44a5 / 242259 MGIID:3035141 Length:720 Species:Mus musculus


Alignment Length:813 Identity:259/813 - (31%)
Similarity:395/813 - (48%) Gaps:127/813 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTESVELMNKYGEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLV 65
            :|||.:  ...|:|.|||.:|.||..: |:||||.|.|:|:||:.|:..:...|..:||..|:..
Mouse    13 ITESED--QDVGDPRRYDPDFQGPTAK-RTCTDVLCCLIFLLFILGYVLLGLLAWAHGDPRKMAY 74

  Fly    66 PTDSFNRKCGMDSGV--LNKKNLFFFDLNQCIDPLVPI-TGCDTPQVCVETCPRETFVWDTM--- 124
            ||||....|| ..|.  .||..||:|::.:|..|.:.: ..|.|.|:||..||.....:..|   
Mouse    75 PTDSQGHFCG-QKGTPNENKTVLFYFNIFRCTSPSMMLRLQCSTTQICVSRCPERFLTYLDMQFL 138

  Fly   125 -KDKQSFAELHSRLICLSEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDY 188
             |:.:::.|.: |..|     ||:.:....::|.:....|......|.|||:||:.:.|      
Mouse   139 NKEDKNYWEYY-RQFC-----KAKAKPVETLRDLLISGDCPLAVYPSRPFLQRCIPDLS------ 191

  Fly   189 IPSFLLNGGRSRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKR 253
                .|||       ...||:.            .|..|...                       
Mouse   192 ----ALNG-------TWTPGSR------------MKFEDGSG----------------------- 210

  Fly   254 RLNEAVIKEKMMQTDTRLA-KLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVA 317
                        ||.|.|. :...|.::...|    |:.:|.|::||...||..:|:.....:..
Mouse   211 ------------QTRTMLEFREAANGISDLIN----ARTIGLKLLEDYATSWKWILIGLTVAMAL 259

  Fly   318 SLIYIALMRWLSAPILWFSIFGVLIGLLVGIYFSVKQYIHWENTP--TVPVHGLNLHSTVKNVLQ 380
            |..::.|:|:.:..:.||.|||||..:..||::...:|...:..|  |..::|..:...|.....
Mouse   260 SWTFLILLRFTAGFLFWFFIFGVLGIIGYGIWYCFLEYSSIQQRPQSTFWMYGFGIQRRVNMFFH 324

  Fly   381 NQNTWLYLSIFVGVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAI 445
            .:.||..:.|.:....::|::::|.||.||::||.|.:|||||:|.:.|.:.:|:.::||....|
Mouse   325 LKETWFSMMIILSAIEIIIIIVLIFLRTRIQVAIILLQEGSKAISYLPSALIYPVLTFILLSICI 389

  Fly   446 AFAIGVGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYT------VGGSCKPEVFQQYC 504
            ::.....::|.:.|.|.|::   :..:|:...||..|:.....||      .|.||.        
Mouse   390 SYWAVTAVFLATSGVPIFKV---MVPAGQCIYEDETCDPEIFPYTNIPKDCPGASCN-------- 443

  Fly   505 SVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYW 569
                .:|:..|:...|...:|.            .||:|.||||..|:.|.....||..||.:||
Mouse   444 ----FAFYGGRSMYHNYILTFQ------------VYNLFAFLWLINFVIALGQCALAGAFASYYW 492

  Fly   570 TFKK-RDVPYFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILC 633
            ..|| .|:|.:.|..||.:...||.|::||||||||.|::.::::||:..:|||..|:..:.:.|
Mouse   493 AMKKPDDIPPYPLFTAFGRAVRYHTGSLAFGSLILASVQMFKVIVEYLDRRLKKAQNSAAQFLHC 557

  Fly   634 CMRCFFWLLETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKL 698
            |::|.||.||..:||||||||||.|::|||||.|..|:|.|:|||.|:|...|:||.|:..|.|:
Mouse   558 CLQCCFWCLEKMVKFLNRNAYIMIALYGKNFCESTRDAFYLLMRNILKVTVTDEVTYFVLLLGKV 622

  Fly   699 LLTAGAGASTYYFLDNNPSII-----RLNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFL 758
            |::...|...:........||     .|||..||...:|..:::|...||.|||..|:|:|:||.
Mouse   623 LVSGIVGVLAFLLFTERLQIIVDGPTTLNYYWVPFLTLVFGSYMIAHGFFSVYSMCVETIFICFC 687

  Fly   759 EDCERNDGSPEKPFFMSKQLMKILGKKNNLPPR 791
            ||.||||||.|||:|::..|..||.||...|.|
Mouse   688 EDLERNDGSAEKPYFVTPSLHSILTKKRPGPQR 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 134/365 (37%)
Slc44a5XP_006501551.1 Choline_transpo 351..691 CDD:367975 135/366 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 278 1.000 Domainoid score I1691
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 440 1.000 Inparanoid score I1648
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53694
OrthoDB 1 1.010 - - D156581at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm43913
orthoMCL 1 0.900 - - OOG6_100798
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2467
SonicParanoid 1 1.000 - - X515
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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