DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and Ctl1

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_316311.5 Gene:Ctl1 / 1276904 VectorBaseID:AGAMI1_007636 Length:690 Species:Anopheles gambiae


Alignment Length:788 Identity:192/788 - (24%)
Similarity:334/788 - (42%) Gaps:185/788 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCGMDS------------GVL 81
            ||.||:..|:|:|:|......||.::...|:..:::...|||...||:.|            ...
Mosquito    18 RSPTDIFWLVLYVVFWIALIVIAVFSFIYGNPLRIINGYDSFGNTCGVRSNDKFSNFPLSGMNTE 82

  Fly    82 NKKNLFFFDLNQCIDPLVPITGCDTPQVCVETCPRETFVWDTMKDKQSFAELH------SRLICL 140
            :|..|||.|:.:....|         ::||:.||:        ::..:.|||:      ...:|.
Mosquito    83 DKPYLFFLDIKELRHTL---------KICVKECPQ--------RELLNAAELYRYYEDRKTKLCR 130

  Fly   141 SEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFLLNGGRSRRELH- 204
            .:.:.:.::|    |:|   ||.|::            |:|: |.|...|.:     :|...|| 
Mosquito   131 YDFNMSMLQT----QEA---NQGAKY------------FDFN-GPCPPFPVY-----QSAPVLHR 170

  Fly   205 MLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDT 269
            .:|......:| |...||..:...:|.                                      
Mosquito   171 CIPTGVNAPLQ-QVKKMYALINSWEAT-------------------------------------- 196

  Fly   270 RLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWLSAPILW 334
                                    :::..||..:|..:::.|..:||.|::.|||:.||:..:.|
Mosquito   197 ------------------------QQVFSDLYKAWPTIVLICALSLVFSIVMIALLHWLATIVSW 237

  Fly   335 FSIFGVLI------GLLVGIYFSVKQYIHWENTPTVPVHGLNLH---STVKNVLQNQNTWLYLSI 390
            .....|::      |:|...|:..|             |.|:..   |.::.:::|:.| :|:..
Mosquito   238 LICIIVVVASVGITGVLWWSYYKAK-------------HTLDTDQQLSYLEELVRNEAT-IYVLA 288

  Fly   391 FVGVCFVVILLLVI-VLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIGVGLY 454
            ....|.::|||:|| .||:::....||.:|..|.:..:......|:.:::.....:||.:.|.:.
Mosquito   289 IAATCIMIILLVVIYYLREKLTGLAALFEEAGKCMLQLPGLAGPPLLAFLALSIFLAFWVVVVVC 353

  Fly   455 LGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRNPCL 519
            |.:...|.   |:.|....::.....:...|.:        |||:    .....|||...:    
Mosquito   354 LATANYPG---VKPLLPLAQLEDSASIANDPKL--------KPEL----AGKNDTSFKSFK---- 399

  Fly   520 NTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKKRDVPYFTLTRA 584
              ...:..:|   .::..::..:.|.:|.|.||.|...:.:|...|.||:. |..|.|   :..|
Mosquito   400 --LVEYHDVN---VLRHMLWIYIIGLIWTSEFIFACQQLAIAGAVAFWYFR-KPTDSP---VLLA 455

  Fly   585 FFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMR---CFFWLLETFL 646
            ..:...||||:||.||||:.|.::.||:|.|::.|||::....:....||:|   |.|||||.|:
Mosquito   456 IAKLVKYHLGSVAKGSLIITIFKIPRLILTYLYAKLKRHQQEGSECASCCLRCCICSFWLLEKFI 520

  Fly   647 KFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTYYF 711
            ::||.|||.:.||.|.|||.:|..::|.::.|.|:|.|::.:.||:.||.||.:.:..|..:...
Mosquito   521 RYLNHNAYTVIAIEGVNFCPAAKIAWNALVTNALQVATINGIGDFVLFLGKLAVASICGLISILL 585

  Fly   712 LDNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPEKPFFMSK 776
            |.:||.   |::...|..::.:.||.|..:...:|...|||||||..||...|..|..   :...
Mosquito   586 LRDNPD---LHFYMAPVIIITVFAFFIAHIILSLYEMVVDTLFLCVCEDRTINGNSGR---WKES 644

  Fly   777 QLMKILGK 784
            .|.::||:
Mosquito   645 NLARLLGE 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 105/357 (29%)
Ctl1XP_316311.5 None

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