DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and LOC1272697

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_061511114.1 Gene:LOC1272697 / 1272697 VectorBaseID:AGAMI1_014793 Length:751 Species:Anopheles gambiae


Alignment Length:797 Identity:358/797 - (44%)
Similarity:488/797 - (61%) Gaps:69/797 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVELMNKY----------GEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFIAQYAIRNG 58
            |.:.:.||          .|||:||.:|.||..: |||||:|||.|||.||..|.::|.||:::|
Mosquito     7 STDRVTKYSKEDIQQPTESEPLKYDPDFKGPLSK-RSCTDLPCLFLFVTFLCAWGYVAYYAVQHG 70

  Fly    59 DLNKLLVPTDSFNRKCGMDSGVLNKKNLFFFDLNQCIDPLVPITGCDTPQVCVETCPRETFVWDT 123
            |||:||||.||..||||:||.|.::..|.||::.:|....|||:||.|.||||..||.:.|.:::
Mosquito    71 DLNRLLVPIDSDGRKCGVDSEVRDEPYLVFFNITECAKIDVPISGCSTTQVCVSQCPNQDFDFES 135

  Fly   124 MK-DKQSFAELHSRLICLSEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCD 187
            .. :..:..|:.|:|||.....|:.:.|...|:..|...:||:...||.|.:.||:....:|.|.
Mosquito   136 ANCNPSNVNEIRSKLICKQNVKKSDLTTCQIIRQYIKSQRCAQTMQKSTPLVNRCVSNIPEGQCT 200

  Fly   188 YIPSFLLNGGRSRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCK 252
            .||          ::....|...:|:.|..|:                              |||
Mosquito   201 LIP----------KQFRQQPPITSTKFQTSAE------------------------------QCK 225

  Fly   253 -RRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLV 316
             :|..|.:::||:.:..:.||:.|.|::: .....|......:.||||::.||.::||...|:::
Mosquito   226 EQRELENILEEKISKLQSFLARYVNNLIS-VLTKNNSVHQTSQMIVEDILESWRMILVFIACSVL 289

  Fly   317 ASLIYIALMRWLSAPILWFSIFGVLIGLLVGIYFSVKQYIHWENTPTVPVH---GLNLHSTVKNV 378
            ||||.||::||::.|::|.||.||:..|..|:|:|.:||......| |..|   ..||.|.|.:.
Mosquito   290 ASLILIAMLRWIAKPLVWISIIGVITALSYGVYYSFRQYQQIRANP-VAAHVNVSPNLSSLVNSW 353

  Fly   379 LQNQNTWLYLSIFVGVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIA 443
            .::..|||::.|.:.|..:|:||:|:||||||.|||||.||||||||:..||||||:..|||...
Mosquito   354 FKSDQTWLWILIALSVILIVLLLVVLVLRKRIVIAIALLKEGSKAVSASFSTVFFPLVPWILQAV 418

  Fly   444 AIAFAIGVGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRL 508
            .|.|::.|.|:|.|||.|.:::      :|..::..|||..   .|..|..|.|..|.:.|  |.
Mosquito   419 VIVFSLLVLLFLASIGVPVYKV------NGLNSSLTCVCTN---GYMEGDICDPVAFNENC--RD 472

  Fly   509 TSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKK 573
            ||...::..||:..|.|..::.|..:::....||.||.|...|:||||.||||.|||.||||.:|
Mosquito   473 TSRIYDQERCLDAACHFQEVDTPGIVRFFHALNVIGFFWCICFVSAFSEMVLAFTFATWYWTRQK 537

  Fly   574 RDVPYFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCF 638
            ..:|:|.|||....|..|||||:||||||:||.::||.:|||:..|||:|||..|||:|||.|||
Mosquito   538 SRLPFFVLTRGVTHTVYYHLGTLAFGSLIIAICKIIRAILEYVDHKLKRYDNGFTRAVLCCCRCF 602

  Fly   639 FWLLETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAG 703
            ||.||:|||||||||||||||:||||||||.|:|:|:.||.|||:.||:||.||||||||||.:|
Mosquito   603 FWCLESFLKFLNRNAYIMCAIYGKNFCSSAKDAFSLLTRNVLRVIALDKVTGFLFFLSKLLLASG 667

  Fly   704 AGASTYYFLDNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSP 768
            ..|.||.:.|::...::|||..||..:|.|..|:|.|:||.|||.||||||||||||.||||||.
Mosquito   668 MAAVTYTYFDSDLPKMQLNYPFVPAVLVFIGTFIIASIFFSVYSVAVDTLFLCFLEDIERNDGSA 732

  Fly   769 EKPFFMSKQLMKILGKK 785
            |:||:||:.|.||||||
Mosquito   733 ERPFYMSRGLQKILGKK 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 195/354 (55%)
LOC1272697XP_061511114.1 None

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