DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and SLC44A3

DIOPT Version :10

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_001107578.1 Gene:SLC44A3 / 126969 HGNCID:28689 Length:653 Species:Homo sapiens


Alignment Length:806 Identity:204/806 - (25%)
Similarity:321/806 - (39%) Gaps:234/806 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PRQRD------RSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCGMDSGVLN 82
            ||||:      |.|||...|.||.||..|..||..|::..|...:||...|||...||..:..:.
Human    16 PRQREWRPQIYRKCTDTAWLFLFFLFWTGLVFIMGYSVVAGAAGRLLFGYDSFGNMCGKKNSPVE 80

  Fly    83 -----------KKNLFFFDLNQCIDPLVPITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSR 136
                       ||::||  :|.| :..|..|..:...:||..||.|..  |::::.|.||.....
Human    81 GAPLSGQDMTLKKHVFF--MNSC-NLEVKGTQLNRMALCVSNCPEEQL--DSLEEVQFFANTSGS 140

  Fly   137 LICLSEEHKAQIRTKSDIQDAINQNQCARWYI---KSAPFLKRCLFEFSQGVCDYIPSFLLNGGR 198
            .:|:...:.... |.|...|::    |.|..:   ||.|...||                     
Human   141 FLCVYSLNSFNY-THSPKADSL----CPRLPVPPSKSFPLFNRC--------------------- 179

  Fly   199 SRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEK 263
                                              ||     |||       :|.......:|   
Human   180 ----------------------------------VP-----QTP-------ECYSLFASVLI--- 195

  Fly   264 MMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWL 328
                                   ||...| .:|:..:::....:|..|...|..||..:...|::
Human   196 -----------------------NDVDTL-HRILSGIMSGRDTILGLCILALALSLAMMFTFRFI 236

  Fly   329 SAPILWFSIFGVLIGLLVGIYFSVKQYIHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVG 393
            :..::...|..|::|||  ....|..:::::.|..:.:........:|.||.      :..:..|
Human   237 TTLLVHIFISLVILGLL--FVCGVLWWLYYDYTNDLSIELDTERENMKCVLG------FAIVSTG 293

  Fly   394 VCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFP-------IFSWILFIAAIAFAIGV 451
            :. .|:|:|:.||||||::.:.|.:..:||:||....:|.|       ||.|:|::|.:      
Human   294 IT-AVLLVLIFVLRKRIKLTVELFQITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVL------ 351

  Fly   452 GLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRN 516
             |.||:.|...                  |.||..:.|      ||                   
Human   352 -LSLGTAGAAQ------------------VMEGGQVEY------KP------------------- 372

  Fly   517 PCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKKRDVP---- 577
                        .:.|...|:  |::.|.:|.|.||.|...|.:|......|:...|.|.|    
Human   373 ------------LSGIRYMWS--YHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSKNDPPDHPI 423

  Fly   578 YFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDN-AVTRAILCCMRCFFWL 641
            ..:|:..||    ||.|||..||.::::||:.|:::.|:...||:..: |::|.:..|..|.||.
Human   424 LSSLSILFF----YHQGTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCFWC 484

  Fly   642 LETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLL---TAG 703
            |:.:|..||:|||...||:|.:||:||.|:|.::.:|.....:::...||:.||.|:|:   |..
Human   485 LDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKNSSHFTSINCFGDFIIFLGKVLVVCFTVF 549

  Fly   704 AGASTYYFLDNNPSIIRLNY------IAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCE 762
            .|            ::..||      .|||..:|...|:|:...|..|:.|.:|.|||||..|.|
Human   550 GG------------LMAFNYNRAFQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLE 602

  Fly   763 RNDGSPEKPFFMSKQLMKILGKKNNL 788
            .||||.|||:||.::.:..:.:.|.|
Human   603 TNDGSSEKPYFMDQEFLSFVKRSNKL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..762 CDD:461337 106/375 (28%)
SLC44A3NP_001107578.1 MdlB <192..>363 CDD:440747 47/231 (20%)
Choline_transpo 289..602 CDD:461337 112/393 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..653
Blue background indicates that the domain is not in the aligned region.

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