DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and SLC44A3

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_001107578.1 Gene:SLC44A3 / 126969 HGNCID:28689 Length:653 Species:Homo sapiens


Alignment Length:806 Identity:204/806 - (25%)
Similarity:321/806 - (39%) Gaps:234/806 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PRQRD------RSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCGMDSGVLN 82
            ||||:      |.|||...|.||.||..|..||..|::..|...:||...|||...||..:..:.
Human    16 PRQREWRPQIYRKCTDTAWLFLFFLFWTGLVFIMGYSVVAGAAGRLLFGYDSFGNMCGKKNSPVE 80

  Fly    83 -----------KKNLFFFDLNQCIDPLVPITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSR 136
                       ||::||  :|.| :..|..|..:...:||..||.|..  |::::.|.||.....
Human    81 GAPLSGQDMTLKKHVFF--MNSC-NLEVKGTQLNRMALCVSNCPEEQL--DSLEEVQFFANTSGS 140

  Fly   137 LICLSEEHKAQIRTKSDIQDAINQNQCARWYI---KSAPFLKRCLFEFSQGVCDYIPSFLLNGGR 198
            .:|:...:.... |.|...|::    |.|..:   ||.|...||                     
Human   141 FLCVYSLNSFNY-THSPKADSL----CPRLPVPPSKSFPLFNRC--------------------- 179

  Fly   199 SRRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEK 263
                                              ||     |||       :|.......:|   
Human   180 ----------------------------------VP-----QTP-------ECYSLFASVLI--- 195

  Fly   264 MMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWL 328
                                   ||...| .:|:..:::....:|..|...|..||..:...|::
Human   196 -----------------------NDVDTL-HRILSGIMSGRDTILGLCILALALSLAMMFTFRFI 236

  Fly   329 SAPILWFSIFGVLIGLLVGIYFSVKQYIHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVG 393
            :..::...|..|::|||  ....|..:::::.|..:.:........:|.||.      :..:..|
Human   237 TTLLVHIFISLVILGLL--FVCGVLWWLYYDYTNDLSIELDTERENMKCVLG------FAIVSTG 293

  Fly   394 VCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFP-------IFSWILFIAAIAFAIGV 451
            :. .|:|:|:.||||||::.:.|.:..:||:||....:|.|       ||.|:|::|.:      
Human   294 IT-AVLLVLIFVLRKRIKLTVELFQITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVL------ 351

  Fly   452 GLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRN 516
             |.||:.|...                  |.||..:.|      ||                   
Human   352 -LSLGTAGAAQ------------------VMEGGQVEY------KP------------------- 372

  Fly   517 PCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKKRDVP---- 577
                        .:.|...|:  |::.|.:|.|.||.|...|.:|......|:...|.|.|    
Human   373 ------------LSGIRYMWS--YHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSKNDPPDHPI 423

  Fly   578 YFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDN-AVTRAILCCMRCFFWL 641
            ..:|:..||    ||.|||..||.::::||:.|:::.|:...||:..: |::|.:..|..|.||.
Human   424 LSSLSILFF----YHQGTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCFWC 484

  Fly   642 LETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLL---TAG 703
            |:.:|..||:|||...||:|.:||:||.|:|.::.:|.....:::...||:.||.|:|:   |..
Human   485 LDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKNSSHFTSINCFGDFIIFLGKVLVVCFTVF 549

  Fly   704 AGASTYYFLDNNPSIIRLNY------IAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCE 762
            .|            ::..||      .|||..:|...|:|:...|..|:.|.:|.|||||..|.|
Human   550 GG------------LMAFNYNRAFQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLE 602

  Fly   763 RNDGSPEKPFFMSKQLMKILGKKNNL 788
            .||||.|||:||.::.:..:.:.|.|
Human   603 TNDGSSEKPYFMDQEFLSFVKRSNKL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 105/374 (28%)
SLC44A3NP_001107578.1 Choline_transpo 288..601 CDD:282384 111/393 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149879
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D329225at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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