DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and Slc44a1

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_006537594.1 Gene:Slc44a1 / 100434 MGIID:2140592 Length:718 Species:Mus musculus


Alignment Length:796 Identity:213/796 - (26%)
Similarity:338/796 - (42%) Gaps:207/796 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DRSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCGM---------DSGV--L 81
            ||||||:|.|||||||..|..||..:::..|...:|:...||:...||.         :||:  .
Mouse    22 DRSCTDIPWLLLFVLFCIGMGFICGFSVATGAAARLVSGYDSYGNICGQRNAKLEAIPNSGLDHT 86

  Fly    82 NKKNLFFFD------LNQCIDPLVPITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSRLICL 140
            ::|.:||.|      :|:.|..:.         :||..|||:..  .|:.|.|.|||::...:| 
Mouse    87 HRKYVFFLDPCNLDLINRKIKSIA---------LCVAACPRQEL--KTLSDVQKFAEINGSALC- 139

  Fly   141 SEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFLLNGGRSRRELHM 205
                                    .:.||.:.:   .|...|.|.|..:|               
Mouse   140 ------------------------SYNIKPSEY---TLTSKSSGFCPKLP--------------- 162

  Fly   206 LPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDTR 270
            :|.:|.                     :|..: :..||:    |.|..:..||:|          
Mouse   163 VPASAP---------------------IPFFH-RCAPVN----ISCYAKFAEALI---------- 191

  Fly   271 LAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWLSAPILWF 335
             ..:..|.|.|             :::..::.|..|:|..|..:||.|:|.:.::|::|..::|.
Mouse   192 -TFVSDNSVLH-------------RLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWI 242

  Fly   336 SIFGVLIGLLVGIYFSVKQYIHWENTPTVPVHGLNLHSTVKNVLQ----NQNTWLYLSIFVGVCF 396
            ....|::|.|.|.......|.....:|.        .:.:...||    |....|..:|...|..
Mouse   243 LTVLVILGSLGGTGVLWWLYAKQRRSPK--------EAVIPEQLQIAEDNLRALLIYAISATVFT 299

  Fly   397 VVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIGVGLYLGSIGDP 461
            |::.|:::|:|||:.:.|||.....|....:...||.|.:::...:...|:.|...|:||:.|. 
Mouse   300 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTLLFLGTTGS- 363

  Fly   462 SFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRNPCLNTTCSFD 526
                                    |:....|       |.:|                       
Mouse   364 ------------------------AVQNEQG-------FVEY----------------------- 374

  Fly   527 SINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKKRDVPYFTLTRAFFQTAVY 591
            .|:.|::..|  :|:|.|.:|:|.||.|...|.:|.....:|:|..||::|:..:..:..:...|
Mouse   375 KISGPLQYMW--WYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRY 437

  Fly   592 HLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLNRNAYIM 656
            ||||||.||.|:.:|::.|:||.|||.:||..:||..|.:|....|..|.||..|.:||:|||..
Mouse   438 HLGTVAKGSFIITLVKIPRMVLMYIHSQLKGKENACARCMLKSCICCLWCLEKCLSYLNQNAYTA 502

  Fly   657 CAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTYYFLDNNPSIIRL 721
            .||:..|||:||.|:|.:::.|.|||..::.|.||:.||.|:|:....|.:         .|:.|
Mouse   503 TAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLFLGKVLIVCSTGLA---------GIMLL 558

  Fly   722 NY------IAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPEKPFFMSKQLMK 780
            ||      ..:|..:|.:.|||:...|..:|...||.|||||..|.:.|||||.:.|:|.|.||:
Mouse   559 NYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLME 623

  Fly   781 ILGKKNNLPPRQRRGK 796
            .:  :|:....:..||
Mouse   624 FV--ENSRKAMKEAGK 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 110/359 (31%)
Slc44a1XP_006537594.1 Choline_transpo 293..603 CDD:367975 115/375 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D329225at2759
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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