DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl2 and slc44a2

DIOPT Version :9

Sequence 1:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_031755250.1 Gene:slc44a2 / 100379903 XenbaseID:XB-GENE-957797 Length:715 Species:Xenopus tropicalis


Alignment Length:795 Identity:272/795 - (34%)
Similarity:410/795 - (51%) Gaps:122/795 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YGEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFIAQYAIRNGDLNKLLVPTDSFNRKCG 75
            ||||.:||.||.|| ..:|.|||:.|.:|.||.:..:..:...|...||..|::.||||..:.||
 Frog    13 YGEPKKYDPNFKGP-IHNRGCTDILCCILIVLGIIAYVAVGIVAWTYGDPRKVIYPTDSKGQFCG 76

  Fly    76 MDSGVLNKKN--LFFFDLNQCIDPLVPIT-GCDTPQVCVETCPRETFVW-DTMKDKQSFAELHSR 136
             .:|..|:|.  ||:|::.:|..|||.:. .|.|||:|||.||.:...: ..:..:|:|.  :.:
 Frog    77 -QAGTPNEKKPFLFYFNIMKCASPLVLLQFQCPTPQICVEKCPDKFLTYLSVVTTQQNFD--YYK 138

  Fly   137 LICLSEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFS--QGVCDYIPSFLLNGGRS 199
            ..|   ::.....:||.: :.:....|......|.||.:||....|  :||              
 Frog   139 QFC---QYGFNNFSKSPV-EVLRDRDCPAMITPSKPFTRRCFPAISTQKGV-------------- 185

  Fly   200 RRELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKM 264
                 ::.||:||......|                   ||..|.:  :::..::.|..:     
 Frog   186 -----VMVGNSTTFDDGTGD-------------------KQRNVTD--LVEGAKKANVVL----- 219

  Fly   265 MQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWLS 329
                                   :|:.:..||.||...||..:::.....:|.|||::.|:|:|:
 Frog   220 -----------------------EARQVAMKIFEDYTVSWYWIIIGLLIAMVISLIFVVLLRFLA 261

  Fly   330 APILWFSIFGVLIGLLVGIYFSVKQY--IHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFV 392
            ..::|..|..|:..:..||:....:|  :..|....|.:..:...:.::..|..:.|||...|.:
 Frog   262 GIMVWVMIVLVIAVMGYGIFHCYMEYARLKGEAGSDVTLKDIGFQTDIRVYLHLRQTWLAFMIIL 326

  Fly   393 GVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIGVGLYLGS 457
            .:..|:::||:|.|||||.|||||.||.|:||.||:|::.||:|:::|....||:.....::|.:
 Frog   327 CILEVIVILLLIFLRKRILIAIALIKEASRAVGSVMSSLVFPLFTFLLVCLCIAYWAITAVFLST 391

  Fly   458 IGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVFQQYCSVRLTSFFQNRNPCLNTT 522
            ..:..:::..:..           |:      ..|.:|.||.|......||         |.:.|
 Frog   392 SNEAVYKVFNETQ-----------CD------FSGKTCDPETFNTTNVTRL---------CPDAT 430

  Fly   523 CSF-----DSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKK-RDVPYFTL 581
            |.|     ::..:...|.:.| ||.|.||||:.|:.|...:.||..||.:||.||| .|:|.|.:
 Frog   431 CQFAFYGGETYYHKYLIVFQI-YNAFMFLWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPI 494

  Fly   582 TRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFL 646
            ..:..:...||.|::||||||||||:|||::|||:..|||..||...|.:|||::|.||.||.|:
 Frog   495 FSSLGRALRYHTGSLAFGSLILAIVQLIRILLEYLDHKLKGADNKCARFLLCCLKCCFWCLEKFI 559

  Fly   647 KFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGAGASTYYF 711
            ||||||||||.||:|.|||:||.::|.|:|||.:||..||:|||||.||.|||:....|...::|
 Frog   560 KFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIVRVAVLDKVTDFLLFLGKLLVVGCVGILAFFF 624

  Fly   712 LDNNPSIIR-----LNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPEKP 771
            ......|::     |||..||...|::.::||...||.||...||||||||.||.||||||.|:|
 Frog   625 FSRRIQIVQDTAPTLNYYWVPILTVILGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSLERP 689

  Fly   772 FFMSKQLMKILGKKN 786
            ::||.:|.:||.||:
 Frog   690 YYMSPELSQILLKKD 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 154/364 (42%)
slc44a2XP_031755250.1 Choline_transpo 324..680 CDD:398290 161/382 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 303 1.000 Domainoid score I1380
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 473 1.000 Inparanoid score I1462
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D156581at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm49084
Panther 1 1.100 - - LDO PTHR12385
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X515
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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