DRSC/TRiP Functional Genomics Resources

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Protein Alignment yem and HPC2

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:NP_009774.4 Gene:HPC2 / 852516 SGDID:S000000419 Length:625 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:143/738 - (19%)
Similarity:257/738 - (34%) Gaps:202/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 RKRMVSSSSESSS---SSSGDDDENDDGNNE---------EDDESDSED--DSEENDESDSEDDS 252
            :|.:|..:|:|.|   .|||......|.|.|         ::..|||||  :...|.:::.:..:
Yeast     3 QKAIVLDNSKSGSKQTKSSGKMQTQTDTNAEVLNTDNSIKKETGSDSEDLFNKFSNKKTNRKIPN 67

  Fly   253 ESESLEDEDSAATAKSSSKYKDNHQAKRAKVIVTGKSKPS----SSSLTSGKKPPTKPI---TTS 310
            .:|.|        ||:.:..|.   |..:.:|::|.|..|    |||.|:....||...   |..
Yeast    68 IAEEL--------AKNRNYVKG---ASPSPIIISGSSSTSPSGPSSSSTNPMGIPTNRFNKNTVE 121

  Fly   311 SSSNSPRP-STVEISDTEDGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTTTVKDMLKAKRDSF 374
            ...:||.| .|...:|||:.:   |...:...::.|:..:.:.|.|                   
Yeast   122 LYQHSPSPVMTTNKTDTEEKR---QNNRNMDNKNTPERGSSSFAAK------------------- 164

  Fly   375 LKSQSGTAAVKGVGNGELKCVSTDVSSSDSSDMESEHGRADRQAGQHGKDGQENLRTADTLLPTT 439
                            :|| :|:.::.|.:.|.::.|        .:..:|.:|...|...:|:.
Yeast   165 ----------------QLK-ISSLLTISSNEDSKTLH--------INDTNGNKNSNAASNNIPSA 204

  Fly   440 LDADIVTAVNSFKEAVKSRDMCGKKFNLDVKLSPLLLRVYEAVLCTDRNERNMVFSHIEYQLQLP 504
            . |::.|..||.:..:|.......|     .|:|       .|:...:|....:..........|
Yeast   205 Y-AELHTEGNSIESLIKPPSSPRNK-----SLTP-------KVILPTQNMDGTIAKDPHLGDNTP 256

  Fly   505 KYYMLRKGKQVRAKEEKRKSTI-MLEKLRRAVAVVMPKAVANYETELRTFAEQAAADVNSELPPK 568
            ...:.:....|....|....:: ...|...::...:.||.|...:..|:.:....:|.|.....|
Yeast   257 GILIAKTSSPVNLDVESTAQSLGKFNKSTNSLKAALTKAPAEKVSLKRSISSVTNSDSNISSSKK 321

  Fly   569 MPRKKFQWTSELRHLLYDVYQARWTSYAFLAK---RKESLEEFINWYLKEKVVELWPPGWMRLDE 630
            ...:|.:.:|              ::.|.|.|   .|.|.:...|                    
Yeast   322 PTSEKAKKSS--------------SASAILPKPTTTKTSKKAASN-------------------- 352

  Fly   631 LQREITRYKNAKLKAKEKPKAPPASASPKPVGVVSAPEQMPPASSYLKAVEDPRSRGNSDTDSAT 695
             ..:.||.|||..|.....|....:.|.     ::..::...:.|.:||.|..:.:|.:.|::..
Yeast   353 -SSDSTRKKNASNKTTSAIKKESNAGSK-----LNTVKKENSSLSSIKATEKEKDKGGNSTEAKN 411

  Fly   696 SASSNSLKRKLKEMPKQTSKPPKKKVAKQVPLQPQLTPHPQFQLAPAATAA------VSIPAISN 754
            |.|:      :::.|  |:|.||:.||     .|.::| |:. |..|.|.|      :.:|....
Yeast   412 STSN------VRKEP--TAKSPKRLVA-----APTVSP-PKI-LQTAETKAKEPSILIDVPLYQA 461

  Fly   755 NNNHLPHLDTLLSMPSTSAQAAALNAAAVAAASTVL-DLASPSRKIDLNTSNNFYNLITAASLAA 818
            :.|  .:||.              |...:...||:: :...|..|......::..||:...|..:
Yeast   462 DTN--DYLDE--------------NGQVIFNLSTLIKEKYHPKSKELAQLKDSKRNLLMQLSDHS 510

  Fly   819 SGN---PSPHSGDGQAKVIVGARPSPHVINLDDYQCTSDILQTSKQLAATTTVITAISKAAQTTS 880
            :|:   .....||              ||.|||   ..|:.:...::...|..:|       ||.
Yeast   511 NGSLEKEKDEEGD--------------VIELDD---DEDMEEDEGEIDTETNTVT-------TTI 551

  Fly   881 VARESSSESDGVEIVGVFPASKP 903
            ..::.|....|..::|.:....|
Yeast   552 SPKKKSHPMKGKNLIGKYDVEDP 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888
UBN_AB 443..633 CDD:290782 28/193 (15%)
HPC2NP_009774.4 HUN 558..601 CDD:400875 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21669
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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