DRSC/TRiP Functional Genomics Resources

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Protein Alignment yem and HPC2

DIOPT Version :10

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:NP_009774.4 Gene:HPC2 / 852516 SGDID:S000000419 Length:625 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:143/738 - (19%)
Similarity:257/738 - (34%) Gaps:202/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 RKRMVSSSSESSS---SSSGDDDENDDGNNE---------EDDESDSED--DSEENDESDSEDDS 252
            :|.:|..:|:|.|   .|||......|.|.|         ::..|||||  :...|.:::.:..:
Yeast     3 QKAIVLDNSKSGSKQTKSSGKMQTQTDTNAEVLNTDNSIKKETGSDSEDLFNKFSNKKTNRKIPN 67

  Fly   253 ESESLEDEDSAATAKSSSKYKDNHQAKRAKVIVTGKSKPS----SSSLTSGKKPPTKPI---TTS 310
            .:|.|        ||:.:..|.   |..:.:|::|.|..|    |||.|:....||...   |..
Yeast    68 IAEEL--------AKNRNYVKG---ASPSPIIISGSSSTSPSGPSSSSTNPMGIPTNRFNKNTVE 121

  Fly   311 SSSNSPRP-STVEISDTEDGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTTTVKDMLKAKRDSF 374
            ...:||.| .|...:|||:.:   |...:...::.|:..:.:.|.|                   
Yeast   122 LYQHSPSPVMTTNKTDTEEKR---QNNRNMDNKNTPERGSSSFAAK------------------- 164

  Fly   375 LKSQSGTAAVKGVGNGELKCVSTDVSSSDSSDMESEHGRADRQAGQHGKDGQENLRTADTLLPTT 439
                            :|| :|:.::.|.:.|.::.|        .:..:|.:|...|...:|:.
Yeast   165 ----------------QLK-ISSLLTISSNEDSKTLH--------INDTNGNKNSNAASNNIPSA 204

  Fly   440 LDADIVTAVNSFKEAVKSRDMCGKKFNLDVKLSPLLLRVYEAVLCTDRNERNMVFSHIEYQLQLP 504
            . |::.|..||.:..:|.......|     .|:|       .|:...:|....:..........|
Yeast   205 Y-AELHTEGNSIESLIKPPSSPRNK-----SLTP-------KVILPTQNMDGTIAKDPHLGDNTP 256

  Fly   505 KYYMLRKGKQVRAKEEKRKSTI-MLEKLRRAVAVVMPKAVANYETELRTFAEQAAADVNSELPPK 568
            ...:.:....|....|....:: ...|...::...:.||.|...:..|:.:....:|.|.....|
Yeast   257 GILIAKTSSPVNLDVESTAQSLGKFNKSTNSLKAALTKAPAEKVSLKRSISSVTNSDSNISSSKK 321

  Fly   569 MPRKKFQWTSELRHLLYDVYQARWTSYAFLAK---RKESLEEFINWYLKEKVVELWPPGWMRLDE 630
            ...:|.:.:|              ::.|.|.|   .|.|.:...|                    
Yeast   322 PTSEKAKKSS--------------SASAILPKPTTTKTSKKAASN-------------------- 352

  Fly   631 LQREITRYKNAKLKAKEKPKAPPASASPKPVGVVSAPEQMPPASSYLKAVEDPRSRGNSDTDSAT 695
             ..:.||.|||..|.....|....:.|.     ::..::...:.|.:||.|..:.:|.:.|::..
Yeast   353 -SSDSTRKKNASNKTTSAIKKESNAGSK-----LNTVKKENSSLSSIKATEKEKDKGGNSTEAKN 411

  Fly   696 SASSNSLKRKLKEMPKQTSKPPKKKVAKQVPLQPQLTPHPQFQLAPAATAA------VSIPAISN 754
            |.|:      :::.|  |:|.||:.||     .|.::| |:. |..|.|.|      :.:|....
Yeast   412 STSN------VRKEP--TAKSPKRLVA-----APTVSP-PKI-LQTAETKAKEPSILIDVPLYQA 461

  Fly   755 NNNHLPHLDTLLSMPSTSAQAAALNAAAVAAASTVL-DLASPSRKIDLNTSNNFYNLITAASLAA 818
            :.|  .:||.              |...:...||:: :...|..|......::..||:...|..:
Yeast   462 DTN--DYLDE--------------NGQVIFNLSTLIKEKYHPKSKELAQLKDSKRNLLMQLSDHS 510

  Fly   819 SGN---PSPHSGDGQAKVIVGARPSPHVINLDDYQCTSDILQTSKQLAATTTVITAISKAAQTTS 880
            :|:   .....||              ||.|||   ..|:.:...::...|..:|       ||.
Yeast   511 NGSLEKEKDEEGD--------------VIELDD---DEDMEEDEGEIDTETNTVT-------TTI 551

  Fly   881 VARESSSESDGVEIVGVFPASKP 903
            ..::.|....|..::|.:....|
Yeast   552 SPKKKSHPMKGKNLIGKYDVEDP 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 127..178 CDD:462581
UBN_AB 436..633 CDD:464081 30/200 (15%)
HPC2NP_009774.4 HUN <569..601 CDD:462581 1/6 (17%)
Blue background indicates that the domain is not in the aligned region.

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