DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yem and ubn2a

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:XP_005165772.1 Gene:ubn2a / 555525 ZFINID:ZDB-GENE-070112-612 Length:1176 Species:Danio rerio


Alignment Length:1234 Identity:286/1234 - (23%)
Similarity:463/1234 - (37%) Gaps:300/1234 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GGEHKRVTLTSIIQGDAGFSRFGSNILEPDAASAAPD--------NSSKPTTKTAKCIRIKLDLF 60
            |.:::|..|......:..|.|.|...:.....:.|.|        :|.:|..||   :|:.|.|.
Zfish    20 GADNRRRRLEEDGAAEMSFDREGRMKMMGTGVTTAGDRGGLIGKRDSEEPKGKT---VRLNLCLS 81

  Fly    61 ETDSNKYPEFNYSRLLYLEKKKTKKLKQVSTTNGSAS-TDPFADNDDD-----VARIVKELEAKY 119
            |.......|||||.|:..::.|    |....:..|.. .|||  |||:     |..:.|:.|:||
Zfish    82 EPSEQCSAEFNYSELIQSQQPK----KNPPCSKSSLDPNDPF--NDDEKERLQVEALAKKFESKY 140

  Fly   120 GNSYATGRGKSKKDDYRDIGMGYDESDSFIDNTEAYDEIIPEEAETLEGGFYINCGALEFKNLTK 184
            ||: ...|.|.:..|..|||.||||||.||||:|||||::|....|..||||||.|.|:|:    
Zfish   141 GNA-GKKRRKDRMQDLIDIGFGYDESDPFIDNSEAYDELVPASLTTKLGGFYINTGTLQFR---- 200

  Fly   185 KSYTTRTDAIIKMPERSRKRMVSSSSESSSSSSGDDDENDDGNNEEDDESDSEDDSEENDESDSE 249
                                       ::|.|.|:|...|:.....|.|.......::.|....|
Zfish   201 ---------------------------AASESEGEDKVKDEKPRIRDGEEPLMKRRKKKDVIGIE 238

  Fly   250 DDSESESLEDEDSAA--------TAKSSSKYKDN-------HQAKRAKVIVTGKSKPSSSSLTSG 299
            :....::...:...|        ..|.....||:       .:..|.|..:. |...|||.|...
Zfish   239 EKKPRKNKVAKQGVAGLSLHRPEKKKRKKLMKDSLCLAAMLRRFTREKEEIR-KQDISSSHLGLT 302

  Fly   300 KKPPTKPITTSSSSNSPRPSTVEISDTEDGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTTTVK 364
            ..|.:..:..:|..:....:..::|..:...||..   .|.|.|..:|:.|              
Zfish   303 SAPNSNNLLQNSHLHIGHANHTDLSLADLTADPAM---MSLLSSANESELQ-------------- 350

  Fly   365 DMLKAKRDSFLKSQSGTAAVKGVGNGELKCVSTDVSSSDSSDMESEHGRADRQAG---------- 419
            |:::                           ..|.||.|::.......|.:.|.|          
Zfish   351 DIMR---------------------------DLDFSSLDAAPQTPPSCRENGQVGMGSSLGNKIG 388

  Fly   420 ----QHGKDGQENLRTADTLLPTTLDADIVTAVNSFKEAVKSRDMCGKK--FNLDVKLSPLLLRV 478
                ..|:.|..:..|    ||..|.|.::..:...:.|.:..|..|:|  |.||  ::.:||.:
Zfish   389 VGGLNRGQAGVVSFPT----LPNGLPAPLIKRIEDLRAASRQFDQEGRKKFFTLD--MNNILLDI 447

  Fly   479 YEAVLCTDRNERNMVFSHIEYQLQLPKYYMLRKGKQVRAKEEKRKSTIMLEKLRRAVAVVMPKAV 543
            ...|.....:.|:.|:||:|..:...|..:|::.|::....:.......|.||:.||..|||:.:
Zfish   448 ELQVQEQPDHVRSEVYSHLEAFVPCNKEALLKRLKKLSLNIQDDSLRTPLLKLKLAVCSVMPEQI 512

  Fly   544 ANYETE--LRTFAEQ--------AAADVNSELPPKM---PRKKFQWTSELRHLLYDVYQARWTSY 595
            |.|..:  .:..|:|        .:.|.:.|.|.|.   |||||.|..:||.||.::.:.:.:.|
Zfish   513 ARYNMDCMAKVAAKQQIEDGEKNGSEDDDEEKPGKRVMGPRKKFIWDDKLRTLLCNLVRVKLSCY 577

  Fly   596 AFLAKRKESLEEFINWYLKEKVVELWPPGWMRLDELQREITRYKNAKLKAKEKPKAPPA------ 654
            . |.:...|:|:::..:::.:|..|||.|||:...|.:| :|..:..|....|.:..|.      
Zfish   578 Q-LEQCSLSVEDYLKAFMENEVKPLWPKGWMQTRMLFKE-SRAVHGHLTGLGKKRIVPTPKAAKM 640

  Fly   655 -----SASPKP-VGVVSAPEQMPPASSYLKAVEDPRSRGNSDTDSATSASSNSLKRKLKEMPKQT 713
                 :..|.| ||..||...:|.::....:..:|....:|..:...:.|.:|:.:.|..:    
Zfish   641 TDMVWTQRPAPGVGSTSASPALPASACRPSSPSEPICLSDSLDEDLAANSLDSISQALALL---- 701

  Fly   714 SKPPKKKVAKQVPLQPQLTPHPQFQLAPAATAAVSIPAISNNNNHLPHLDTLLSMPSTSAQ---- 774
                 ...||      .|||:       ...||.|.|::..:::.:.|..:.||..:.||:    
Zfish   702 -----SNAAK------GLTPN-------NGIAASSAPSVPGSSSGVTHYSSPLSHSTLSAKMEPS 748

  Fly   775 AAALNAAAVAAASTVLDLASPSRKIDLNTSNNFYNLITAASL-AASGNPSPHSGDGQAKVIVGAR 838
            ...|...:..:.|..|.::|||..:   ..:||..|....:| ..||.|:..:|......:..|:
Zfish   749 GIPLGNMSSISTSPSLSISSPSSSM---RGDNFGMLKDGGALQRLSGTPTHRAGISGMSTVQSAK 810

  Fly   839 PSPHVINLDDYQCTSDILQTSKQLAATTTVITAISKAAQTTSVARESSSE--SDGVEIVGVFPAS 901
            |.|.       ...|.:|...::...|..|     |..||..:.:..:::  :.|..:|     |
Zfish   811 PRPP-------PTASPLLPPQQRSYGTMGV-----KMVQTPPLVKNCANKPTTGGNTVV-----S 858

  Fly   902 KPQKKV---QSKPKNKTQNRGRSSLGAVGQV--NGS------------LGYSANNMYIYNSPR-- 947
            :|:...   |..|...|.:...:.|..|..:  |.|            ..:|:|:..|..:||  
Zfish   859 QPRVNANPSQQSPPPPTTSSPSTLLAQVKTIPHNQSNFITPMQATLTKSSHSSNSPIIKLTPRPP 923

  Fly   948 ------------TLGPVYDLTDPHIMKTMSNLKEMEKQF-----IQAAFSPNSVKGAS------- 988
                        :..|......|.::.|..........|     .|||...::||..|       
Zfish   924 VPTPPPSSSPSPSSSPSLTHPRPQLIPTSHQFTPKSPAFRPPFTTQAAGVTSAVKSISGQASYSF 988

  Fly   989 -GGMGSSAP---------STP-TRQXHSGSAAQQPLPAAVTAFYNQEAM----AAAIVLSTMSHA 1038
             ||..|::|         :|| |....:......|.|:|..|.:||...    |:.:..|:.|. 
Zfish   989 AGGHKSASPPVGGASITNTTPMTAPLSAACKDGSPSPSAPLANHNQRQRQVGGASQVAKSSTSR- 1052

  Fly  1039 SPRYDLLANGSVSMSAAQVGASANTLPQVFVKPSLPQ--PSAGGDVVTTTGAARPSTQQLPTKF 1100
                                |||.|||...|...|.|  ||:|.:::   |:..||   ||..|
Zfish  1053 --------------------ASAMTLPSPPVSSHLSQGSPSSGSNLL---GSVPPS---LPLGF 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888 29/48 (60%)
UBN_AB 443..633 CDD:290782 56/204 (27%)
ubn2aXP_005165772.1 HUN 149..198 CDD:285888 29/48 (60%)
UBN_AB 412..614 CDD:290782 56/204 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 80 1.000 Domainoid score I8531
eggNOG 1 0.900 - - E1_KOG4786
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I4079
OMA 1 1.010 - - QHG47800
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002638
OrthoInspector 1 1.000 - - otm25217
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21669
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4833
SonicParanoid 1 1.000 - - X2355
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1111.050

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