DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yem and Ubn2

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:XP_006236368.1 Gene:Ubn2 / 312248 RGDID:1310722 Length:1332 Species:Rattus norvegicus


Alignment Length:1182 Identity:274/1182 - (23%)
Similarity:452/1182 - (38%) Gaps:280/1182 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PDAASAAPDNSSKPTTKTAKCIRIKLDLFETDSNKYPEFNYSRLLYLEKKKTKKLKQVSTTNGSA 96
            |..:::..:...:|..:|   :|::|.|.:.......||:|..||...::: |||..        
  Rat    95 PRESASRAEPPPRPPKET---VRLELVLKDPTDESCVEFSYPELLLCGEQR-KKLVH-------- 147

  Fly    97 STDPFADND---DDVARIVKELEAKYGNSYATGRGKSKKDDYRDIGMGYDESDSFIDNTEAYDEI 158
            :.|||.|..   .:|..:.|:.|.|||.. |....|.:..|..|||.||||:|.||||:|||||:
  Rat   148 TEDPFTDEHKERQEVEMLAKKFEMKYGGK-ARKHRKDRLQDLIDIGFGYDETDPFIDNSEAYDEL 211

  Fly   159 IPEEAETLEGGFYINCGALEFKNLTKKSYTTRTDAIIKMPERSRKRMVSSSSESSSSSSGDDDEN 223
            :|....|..||||||.|.|:|:                                .:|.:.:||..
  Rat   212 VPASLTTKYGGFYINTGTLQFR--------------------------------QASDTEEDDFT 244

  Fly   224 DDGNNEEDDESDSEDDSEENDESDSEDDSESESLEDE-----------DSAATAKSSSKYKDNHQ 277
            |:..::.......:||..|..:...:::.|.|....:           :|..:.|...:|||:  
  Rat   245 DNQKHKPPKVPKIKDDDIEAKKRKRKEEGEKEKKPRKKVPKQLGVVALNSHKSEKKKKRYKDS-- 307

  Fly   278 AKRAKVIVTGKSKPSSSSLTSGKKPPTKPITTSSSSNSPRPSTVEISDTED----GQDP-----I 333
            ...|.:|...:.:..:....|..|.|..| :|||....|..:|....|..|    ..||     :
  Rat   308 LSLAAMIRKFQKEKDALKKESTPKVPVIP-STSSLPKPPCAATTLGDDIPDLSLNSADPDLPIFV 371

  Fly   334 QTQPSSQLQSLPQSQAQAQALKKVVKTTTVKDMLKAKRDSFLKSQSGTAAVKGVGNGELKCVSTD 398
            .|......|       :|:...:::.......:|.|..|....|:||                  
  Rat   372 STNEHELFQ-------EAENALEMLDDFDFDRLLDATSDGSPLSESG------------------ 411

  Fly   399 VSSSDSSDMESEHGRADRQAGQHGKDGQENL------RTADTL---LPTTL-----DADIVTAVN 449
                                |::|...|...      :...||   ||..|     |..:|:|..
  Rat   412 --------------------GENGNTTQPTFASQVVPKVVPTLPDGLPVLLEKRIEDLRVVSAAK 456

  Fly   450 SFKEAVK----SRDMCGKKFNLDVKLSPLLLRVYEAVLCTDRNERNMVFSHIEYQLQLPKYYMLR 510
            .|.|..:    ::||  ....||::|.   |:....|:      |:.|:||:|..:...|..:::
  Rat   457 LFDEEGRKKFFTQDM--NNILLDIELQ---LQELGPVI------RSGVYSHLEAFVPCNKETLVK 510

  Fly   511 KGKQVRAKEEKRKSTIMLEKLRRAVAVVMPKAVANYETELRTFAEQAAA--------------DV 561
            :.|::....:..:....|:||:.||:.|||:.:..|:.:.:..::...|              |.
  Rat   511 RLKKLHLNVQDDRLREPLQKLKLAVSNVMPEQLFKYQEDCQARSQAKCAKLQADEEREKNGSDDD 575

  Fly   562 NSELPPKM---PRKKFQWTSELRHLLYDVYQARWTSYAFLAKRKESLEEFINWYLKEKVVELWPP 623
            :.|.|.|.   |||||.|...:|.||.::.:.:...|.....:.:|.|:::..:::.:|..|||.
  Rat   576 DDEKPGKRVIGPRKKFHWDDTIRTLLCNLVEIKLGCYELEPNKSQSAEDYLKSFMETEVKPLWPK 640

  Fly   624 GWMRLDELQREITRYKNAKLKAKEKPKAPPAS-ASPKPVGVVSAP-EQMPPASSYLKAVEDPR-- 684
            |||:...|.:|.....|....|..|.|..||| ...|.|.|.:.| ...|.........:||:  
  Rat   641 GWMQARMLFKESRSVHNHLTSAPAKKKVIPASKPKVKEVMVKTLPVRSFPTMLKECSPKKDPKAP 705

  Fly   685 -----SRGNSDTDSATS--ASSNSLKRKLKEMPKQTSKPPKKKVAKQVPLQPQLT-PHPQFQLAP 741
                 |.|...|.|:||  ||::|           :|.|.::.:.....|...|: |.....|..
  Rat   706 ASVVASGGCPCTSSSTSIVASASS-----------SSTPAQETICLDDSLDEDLSLPSASLDLVS 759

  Fly   742 AATAAVSIPAISNNNNHLPHLDTLLSMPSTSAQAAALNAAAVAAASTVLDLASPSRKIDLNTSNN 806
            .|.|.:      ||.|..|.:.:.|::|:|..: ..|....:|:..:.|.||:| :|:|...:.:
  Rat   760 EALAVI------NNGNKGPSVSSRLNVPTTKPR-PGLREEKLASIMSKLPLATP-KKLDSPQTAH 816

  Fly   807 FYNLITAASLAASGNPSP-------HSGDGQAKVI--------VGARPSPHVINLDDYQCTSDIL 856
            ..:||     |....|.|       |:|.....:.        |...|.|..:.....|.:|.|.
  Rat   817 SSSLI-----AGHTGPVPKKPQDLAHTGISSGLIAGSSIQNPKVSLEPLPARLLQQGLQRSSQIH 876

  Fly   857 QTSKQL-AATTTVITAISKAAQTTSVARESSSESDGVEIVGVFPASKPQKKVQSKPKNKTQNRGR 920
            .:|.|. .:::....|.|..|..||.|:::||.:   ::..|...|..|:..             
  Rat   877 ASSSQTHVSSSQAQAAASSHALGTSEAQDASSLT---QVTKVHQHSAVQQNY------------- 925

  Fly   921 SSLGAVGQVNGSLGYSANNMYIYNSPRTLGPVYDLT-DPHIMKTMSNLKEMEKQFIQ--AAFSPN 982
                 |..:..::..|..|           ||..|: :|.:..:...||..||..:.  ...:|:
  Rat   926 -----VSPLQATISKSQTN-----------PVVKLSNNPQLSCSSQLLKTSEKPLMYRLPLSTPS 974

  Fly   983 SVKGASGG---MGSSAPSTPTRQXHSGSAAQQPLPAAVTAFYNQEAMAAAIVL------------ 1032
            ...|:.|.   :..:||||.|...:...|....:  :...|.:..:|||:..|            
  Rat   975 PGNGSQGSHPLVSRTAPSTTTSSNYLAKAMVSQI--STQGFKSPFSMAASPKLAASPKPATSPKP 1037

  Fly  1033 --STMSHASPRYDLLANGSVSMSAAQVGASANTLPQVFVKPSLPQPS---AGGDVVTTTGAA--R 1090
              |.....||:..|.|..|||   .::.:.:|..|:..|.||...|:   |.....|:...|  :
  Rat  1038 LTSPKPSVSPKPSLSAKPSVS---TKLISKSNPTPKPAVCPSSSSPNTLVAQSSHSTSNNPAHKQ 1099

  Fly  1091 PS----TQQLPT 1098
            ||    ::|.||
  Rat  1100 PSGMNISRQSPT 1111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888 28/48 (58%)
UBN_AB 443..633 CDD:290782 52/210 (25%)
Ubn2XP_006236368.1 HUN 182..231 CDD:285888 28/48 (58%)
UBN_AB 442..650 CDD:290782 54/218 (25%)
Ustilago_mating <1019..1134 CDD:114448 26/96 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9319
eggNOG 1 0.900 - - E1_KOG4786
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4099
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002638
OrthoInspector 1 1.000 - - otm45761
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21669
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2355
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1010.010

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