DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yem and Ubn1

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:NP_001100447.2 Gene:Ubn1 / 302935 RGDID:1311582 Length:1135 Species:Rattus norvegicus


Alignment Length:1234 Identity:282/1234 - (22%)
Similarity:435/1234 - (35%) Gaps:332/1234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AKCIRIKLDLFETDSNKYPEFNYSRLLYLEKKKTK------KLKQVSTTNGSASTDPFADNDDD- 107
            |..:||.|.|||.|..:.|||.|..|:...:.|.|      |.|.|        .|||.|.:.: 
  Rat    42 AAAVRITLTLFEPDHKRCPEFFYPELVKNTRGKVKGLHPGDKKKDV--------LDPFNDEEKER 98

  Fly   108 --VARIVKELEAKYGNSYATGRGKSKKDDYRDIGMGYDESDSFIDNTEAYDEIIPEEAETLEGGF 170
              |..:.::.|.|||..   .|.|.:..|..|:|.|||||||||||:|||||::|....|..|||
  Rat    99 HKVEALARKFEEKYGGK---KRRKDRIQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGF 160

  Fly   171 YINCGALEFKNLTKKSYTTRTDAIIKMPERS--RKRMVSSSSESSSSSSGDDDENDDGNNEEDDE 233
            |||.|.|:|:..::..     |..||..::.  :||.:....|...            ..::||.
  Rat   161 YINSGTLQFRQASESE-----DDFIKEKKKKSPKKRKLKEGGEKIK------------KKKKDDT 208

  Fly   234 SDSEDDSEENDESDSEDDSESESLEDEDSAATAKSSSKYKDNHQAKRAKVIVTGKSKPSSSSLTS 298
            .|.|..|:::..|              .:..||.::||.|              |.|..|.||: 
  Rat   209 YDKEKKSKKSKFS--------------KAGFTALNASKEK--------------KKKKYSGSLS- 244

  Fly   299 GKKPPTKPITTSSSSNSPRPSTVEISDTEDGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTTTV 363
             .:...|.......:...|         |:...|:... |.:.|.|.:.:..:..|..:..:|:.
  Rat   245 -VREMLKKFQKEKEAQKKR---------EEEHKPVAVS-SVEAQGLRELEGTSDPLLSLFGSTSD 298

  Fly   364 KDMLKAKRDSFLKSQSGTAAVKGVGNGEL-KCVSTDVSSSDSSDMESEHGRADRQAGQHGKDGQE 427
            .|:|:|           ..|:..:.:.:| :.:|.....|...||:               ||.:
  Rat   299 NDLLQA-----------ATAMDSLTDLDLEQLLSESPEGSPFRDMD---------------DGSD 337

  Fly   428 NL--------RTADTL---LPTTLDADIV-------TAVNSFKEAVKSRDMCGKKFNLDVKLSPL 474
            :|        |...:.   |||.|:..:.       .|....|:...::|:.|...:::|:...|
  Rat   338 SLGVGLDQEFRQPSSFPEGLPTPLEKRVKELAQAARAAEGDSKQKFFTQDINGILLDIEVQTREL 402

  Fly   475 LLRVYEAVLCTDRNERNMVFSHIEYQLQLPKYYMLRKGKQVRAKEEKRKSTIMLEKLRRAVAVVM 539
            ..::           |:.||:::...|...|..::::.:::...|:..:....|:||:.|:...|
  Rat   403 TSQI-----------RSGVFAYLASFLPCSKDALVKRARKLHLYEQGGRLKEPLQKLKDAIGRAM 456

  Fly   540 PKAVANYETELRTFAEQAAADVNSELPPKM----------------------PRKKFQWTSELRH 582
            |:.||.|:.|.:...:...|.:..|...|.                      |||||||..|:|.
  Rat   457 PEQVAKYQDECQAHTQAKVAKMLEEEKDKEQRERICSDEEEDEEKGGRRIMGPRKKFQWNDEIRE 521

  Fly   583 LLYDVYQARWTSYAFLAKRK-ESLEEFINWYLKEKVVELWPPGWMRLDELQREITRYKN--AKLK 644
            ||..|.:.:..|.......| ::.|:.:..:|..:|..|||.|||:...|.:|..|...  ..|.
  Rat   522 LLCQVVKIKLESRDLERNSKAQAWEDCVKAFLDAEVKPLWPKGWMQARTLFKESRRGHGHLTSLL 586

  Fly   645 AKEKPKAP----PASASPKPVGVVSAPEQMPPASSYL-------------KAVEDPRSRGNSDTD 692
            ||:|..||    ...:|.||...||.|.......:.|             .:.|.|.......||
  Rat   587 AKKKVIAPSKVKTKESSVKPDKKVSIPSGQHGGPTTLLSEHQGGGLNIGANSREHPSQATCGLTD 651

  Fly   693 SATSASSNSLKRKLKEMPKQTSKPPKKKVAKQVPLQPQLTPHPQFQL-----APAATAAVSIPAI 752
            .......:||...|...|..:.....|::|   .|..:.....:|.|     ||....|..:...
  Rat   652 PVPVTLEDSLDEDLVRNPASSVDAVSKELA---VLNSRAANSSEFTLPAPSKAPTEKVAGVLCTE 713

  Fly   753 SNNNNHLPHLDTLLSMPSTSAQAAALNAAAVAAASTVLDLASPSRK------------------- 798
            ...|...|   :..:.|.|:|..:.||..|..|.:  |..:|..:|                   
  Rat   714 EKRNFTKP---SSSAPPPTNALQSPLNFLAEQALA--LGQSSQEKKPEGSGYKELSCQAPLSKGM 773

  Fly   799 IDLNTSNNFYNLITAAS---LAASGNPSP-----HSGDGQAKVIVGARPSPHVINLD-----DYQ 850
            .:|:.|...::.:...|   .||:..|.|     |:|..|.|..  ..|||.|..|.     ..|
  Rat   774 PELHQSKAKHHSLQRTSHGPQAAAPVPGPQVKVFHAGTQQQKSF--TPPSPFVNKLQGPKATSPQ 836

  Fly   851 CTSDILQ----------------------------TSKQLAATTTVITAISKAAQTTSV------ 881
            |....||                            :.|..|:.:|.|:..:|....:||      
  Rat   837 CHRSFLQLVKTAAKGQSFHATMPASSGSSPASSSSSHKTTASNSTTISHPAKLHPASSVGPSYKN 901

  Fly   882 ------------ARESSSESDGVEI---------VGVFPASKPQKKVQSKPKN---KTQNRGRSS 922
                        |..|:|...|.::         .||.|.|..|...::.|.:   ||....:.:
  Rat   902 NPFAGSISKHGAASSSTSSGGGAQVQSSVSGTLLPGVQPPSAGQPASRTAPSSAVKKTPVTQKLT 966

  Fly   923 LGA-VGQVNGSLGYSANNMYIYNSPRTLGPVYDLTDPHIMKTMSNLKEMEKQFIQAAFS-PNSVK 985
            |.| .|..||..|..           |.|....||        |:||......:.::.| |....
  Rat   967 LVAPPGGPNGDSGGG-----------TQGVAKLLT--------SSLKPAAVSSVTSSTSLPKGTG 1012

  Fly   986 GA------------SGGMGSSAPSTPTRQXHSGSAAQQPLPAAVTAFYNQEAMAAAIVLSTMSHA 1038
            ||            |....|:.|..|.....:......|.|..|.:| :.::.|.|.|.......
  Rat  1013 GAVLLSNNSSLSLLSSSYKSNTPKLPGTMNSNSLGIITPFPLHVLSF-SADSSAKAGVSKDAIVT 1076

  Fly  1039 SPRYDLLANG-SVSMSAAQVGASANT--LPQVFVKPSLPQPSAGGDVVTTTGAARPSTQQLPTK 1099
            .|......:| |.|:.|....:..:|  ||...|...:||             :.|.|.||..|
  Rat  1077 GPAPGTFHHGLSHSLLAGLHSSPPHTAPLPHAAVSTHVPQ-------------SLPDTSQLHGK 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888 29/48 (60%)
UBN_AB 443..633 CDD:290782 49/219 (22%)
Ubn1NP_001100447.2 HUN 119..168 CDD:285888 29/48 (60%)
UBN_AB 360..573 CDD:290782 50/223 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9319
eggNOG 1 0.900 - - E1_KOG4786
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4099
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002638
OrthoInspector 1 1.000 - - otm45761
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21669
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2355
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.050

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