DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yem and pqn-80

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:NP_001299887.1 Gene:pqn-80 / 176683 WormBaseID:WBGene00004161 Length:1449 Species:Caenorhabditis elegans


Alignment Length:1118 Identity:225/1118 - (20%)
Similarity:357/1118 - (31%) Gaps:401/1118 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SAAPDNSSKPTTKTAK--CIRIKLDLFETDSNKYPEFNYSRLLYLEKKKTKKLKQVSTTNGSAST 98
            |.......|...|:||  .|:|::.:.:..|.||...::..||              ..||... 
 Worm     3 SLGSSKKKKKAEKSAKNEVIQIRISVAKPGSKKYTHVDWEELL--------------KNNGKER- 52

  Fly    99 DPFADNDDDVARIVKE----LEAKYGNSYATGRGKSKK------DDYRDIG--MGYDESDSFIDN 151
                 ::||:.|...|    :..|.|.:    |.||.|      |..:...  .|||..|.|||:
 Worm    53 -----DEDDLRRFYDEDTLFMAKKLGET----RSKSGKKLRVNLDQLQHFNRKCGYDMDDDFIDD 108

  Fly   152 TEAYDEIIPEEAETLEGGFYINCGALEFKNLTKKSYTTRTD---AIIKMPERSRKRMV------- 206
            ||..|:   |...:.:||||:..|.::..|...:.....||   :|.::|::.:.|.:       
 Worm   109 TEIVDD---EPTTSKKGGFYVGKGDVKDSNDEDEEEEEETDVEESIQEVPKKVKIRKIKEKSGEK 170

  Fly   207 SSSSESSSSSSGDDDENDDG--------------------------------------------N 227
            ||.|..|||||..|.|:..|                                            .
 Worm   171 SSKSSDSSSSSSSDSEDAAGPPRMTGAPPSIRMVSSSSSLKKLPAPRKPSPPPAVEPTRSVEIIE 235

  Fly   228 NEEDDESDSE-----------DDSEENDESDSEDDSESESLEDEDSAATAKSSSKYKDNHQAKRA 281
            ..|..|..:|           :.:|:..:.||...||...|.| |:|..||     |....|::.
 Worm   236 KPEKTEKPAEKRKTAATTSALEPAEKKKKPDSSSSSEEIILID-DNAPAAK-----KQPESAQKG 294

  Fly   282 KVIVT-------------GKSKPSSSSLTSGKKPPTKPITTSSSSNSPRPSTVEISDTE------ 327
            ...||             .|.||||||:|     |:||...::|:    |...||...|      
 Worm   295 STTVTMSAKKICKQQEEIAKQKPSSSSVT-----PSKPAAPTAST----PKKEEIGTLETFLKNI 350

  Fly   328 ----DGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTTTVKDMLKAKRDSFLKSQS---GTAAVK 385
                |.:..:..:  .:|::.     ..:.||::   ||..|::|..:...:..:.   ..|...
 Worm   351 FANLDAKGKLYQE--KKLKTF-----DTETLKEI---TTFIDVMKHHKTEKVNMEPLIYSLAKSF 405

  Fly   386 GVGNGE-LKCVSTDVSSSD---------------SSDMESEHGRADRQAGQHGKDGQENLRTADT 434
            |:...| :|.|..::||..               ||....|...||.:..|             |
 Worm   406 GMTTQEVMKQVEQEISSKKATTPKPSTNAVLSTISSQKSLEKNAADWKLTQ-------------T 457

  Fly   435 LLPTTLDADI---VTAVNSFK------------------EAVKSRDMCGKKFNLDVKLSPLLLRV 478
            .|||..:.||   .|.|.|:|                  :...:.|...|||...:...|     
 Worm   458 DLPTMGEKDIQMLTTIVRSWKSKKEISNSMVTGWLKDVNQLKMNADQARKKFFDIINTLP----- 517

  Fly   479 YEAVLCTDRNERN---------------------------MVFSHIEYQLQLPKYYMLRKGKQVR 516
                   |.:|:|                           :..|....:|||||........:..
 Worm   518 -------DSSEKNGGGGQQDANDIPKHERSRKARMFLHQWVYLSRKFLELQLPKLKHHSPPVEGL 575

  Fly   517 AKEEKRKSTIMLEKLRRAVAVVMPKAVANYETELRTFAEQAAADVNSELPPKMPRKKFQWTSELR 581
            ||::...:..:.|.:|:.:::        :|.:..|         :|.||.. |...||:|..:.
 Worm   576 AKKQVIAANAIKEGVRKQISL--------FENKKET---------SSRLPGD-PVYVFQFTEPVL 622

  Fly   582 HLLYDVYQARWTSYAFLAKR--------------------------------------------K 602
            ..:.. |......||..||:                                            |
 Worm   623 TAVAP-YLEDLVDYALAAKKIELIVSGIDALHQSTDGKITIIQFYIEICRRLQKLSFLAVEEPMK 686

  Fly   603 ESLEEFINWYLKEKVVEL------WPPGWMR--LDELQREITRYKNAKLK-AKEKPKAPPASASP 658
            ..|:|.....:|.:||::      ||.|...  |..|.||:..:..:.|. ...||.||   |:|
 Worm   687 SRLKEANEQIMKHQVVQIPKYQLKWPDGQAEPSLKGLNRELYEFDKSILSMVAAKPSAP---ATP 748

  Fly   659 KPVGVVSAPEQMPPASSYLKAVEDPRSRGNSDTDSATSASSNSLKRKLKEMPKQTSKPPKKKVAK 723
            |    .|:...:.|::|...:.:...|...:.|.|:|||..                      ||
 Worm   749 K----ASSSTALRPSTSSTPSQQQSTSTAKAMTSSSTSAED----------------------AK 787

  Fly   724 QVPLQPQLTP-HPQFQLAPA--ATAAVSIPAISNNNNHLPHLDTLLSMPSTSAQAAALNAAAVAA 785
            ::....||.. :....|.|.  :||.:..|.|...|:     |.||.|           ..||.:
 Worm   788 RLLAMNQLVQVYAGKYLLPTGNSTADICDPTICLMND-----DILLIM-----------VTAVYS 836

  Fly   786 ASTVLDLASPSRKIDLNTSNNFYNLITAASLAASGNPSPHSGDGQAK----VIVGARPSPHVINL 846
            ....|          :|..|...|::...              ||.:    :......:...:..
 Worm   837 CGIPL----------VNQMNMLKNVLCQV--------------GQTRMAQTLATQKTQNKQCLTQ 877

  Fly   847 DDYQCTSDIL----QTSKQLAATTTVITAISKAAQTTSVARESSSESDGVEIVGVFP--ASKPQK 905
            :|||...|..    :..:|..|.......:.|..:.....:|..:|.|.:| ...|.  ..|.|:
 Worm   878 NDYQLLFDYFGKFEKALEQRKAKKEEAERLKKLEEKLKKEKEKQAEKDRIE-AKKFEERMKKEQE 941

  Fly   906 KVQSKPKNKTQNR 918
            |.:.|.:.:.:.|
 Worm   942 KQEEKERKEREKR 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888 20/56 (36%)
UBN_AB 443..633 CDD:290782 49/289 (17%)
pqn-80NP_001299887.1 PTZ00121 <891..1072 CDD:173412 13/65 (20%)
COG4372 <969..>1207 CDD:226809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002638
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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