DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yem and ubn1

DIOPT Version :9

Sequence 1:NP_001263054.1 Gene:yem / 43439 FlyBaseID:FBgn0005596 Length:1101 Species:Drosophila melanogaster
Sequence 2:XP_031748697.1 Gene:ubn1 / 100380192 XenbaseID:XB-GENE-995164 Length:1079 Species:Xenopus tropicalis


Alignment Length:1243 Identity:284/1243 - (22%)
Similarity:434/1243 - (34%) Gaps:374/1243 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PDNSS----------KPTTKTAKCIRIKLDLFETDSNKYPEFNYSRL-----------LYLEKKK 82
            |.|||          :..|..|..:||.|.|||.|..:.|||.|..|           |:.||.:
 Frog    17 PPNSSAVKRQRSEEQESETPAAATVRIALTLFEPDQKRCPEFCYPELLRNLRGDSRKSLHGEKSQ 81

  Fly    83 TKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNSYATGRGKSKKDDYRDIGMGYDESDS 147
            .|.|..:|.......         :||.|.:..|.||||.   .|.:.:..|..|:|.|||||||
 Frog    82 KKVLNILSEEEAERK---------EVANIARRFEEKYGNK---KRRRDRMQDLIDMGYGYDESDS 134

  Fly   148 FIDNTEAYDEIIPEEAETLEGGFYINCGALEFKNLTKKSYTTRTDAIIKMPERSRKRMVSSSSES 212
            ||||:|||||::|....|..||||||.|.|:|:                           .:|||
 Frog   135 FIDNSEAYDELVPASLSTKYGGFYINSGTLQFR---------------------------QASES 172

  Fly   213 SSSSSGDDDENDDGNNEEDDESDS----------------------------EDDSEENDESDSE 249
                      .|:.:.|:..:|..                            :|..|:..:....
 Frog   173 ----------EDEASKEKKKKSPKVKLTLQAFFPVASINDLFFVLLLPPQKIKDRGEKVKKKKRA 227

  Fly   250 DDSESESLEDEDSAATAKSSSKYKDN------------HQAKRA-KVIVTGKSKPSSSSLTSGKK 301
            :|.:|:..:......||.:.:|.|..            .|.|.| |.|:|               
 Frog   228 EDKKSKKNKHPKPGFTALNGTKDKKKKKHSIFKMLARFEQEKNAQKTIIT--------------- 277

  Fly   302 PPT-----KPITTSSSSNSPRPSTVEISDTEDGQDPIQTQPSSQLQSLPQSQAQAQALKKVVKTT 361
            |||     ||...|.....|:|:..|...|.|        |:                    .::
 Frog   278 PPTPTPTVKPSGISQQPTLPKPTPREAELTPD--------PT--------------------MSS 314

  Fly   362 TVKDMLKAKRDSFLKSQSGTAAVKGVGNGELKCVSTDVSSSDSSDMESEHGRADRQAGQHGKDGQ 426
            .|.::|||           .:|:..:....::.|...:.       |.:|       |..|....
 Frog   315 HVSELLKA-----------VSAIDSISEKPIENVPNTLP-------EKKH-------GVQGGTAS 354

  Fly   427 ENLRTADTLLPTTLDADIVTAVNSFKEAVKSRDMCGKKFNL--DVKLSPLLLRVYEAVLCTDRNE 489
            |....|...||..|...:...:....:||::.:  |:|..|  ..:::..||.:|........:.
 Frog   355 EQATKAPASLPEGLPFALEKRIKELTKAVRASE--GEKKGLLFSQEMNSALLDIYLLSRELSSSL 417

  Fly   490 RNMVFSHIEYQLQLPK---------YYMLRKGKQVRAKEEKRKSTIMLEKLRRAVAVVMPKAVAN 545
            |..||||:...|...|         .|:.::|.::|..         |.||:.|||..||:.::.
 Frog   418 RLAVFSHLASVLPCGKDTLVKWATRLYLHKQGGRLREP---------LRKLKEAVARAMPEQISK 473

  Fly   546 YETELRTF--------------AEQAAADVNSELPPK------MPRKKFQWTSELRHLLYDVYQA 590
            |..|.:.:              .||.|.....|...|      .||||||||.|:|.||..:.:.
 Frog   474 YHEECKVYNQAKYAKLLEEDKEREQKAGSAEEEEGEKGGRKSSGPRKKFQWTDEIRQLLSQLVRT 538

  Fly   591 RWTSYAFLAKRKESLEEFINWYLKEKVVELWPPGWMRLDELQREITR------------------ 637
            :...:........|||:::..:|..:|..|||.|||:...|.:|..|                  
 Frog   539 KVDMFEQEENGVPSLEDYLKSFLDGEVKPLWPRGWMQASTLFKESRRGYPQLSSILAKNRAMTAQ 603

  Fly   638 ---YKNAKLKAKEKPKAPPASASPKPVGVVSAPEQM------PPA-----SSYLK-------AVE 681
               .|::..|.::||..||..|:...|....:.:.|      ||.     |||.:       .:.
 Frog   604 KVKIKDSSNKNEKKPALPPKEAATDTVATSVSSKDMVSSSGPPPVVASSLSSYTQDNSLDGDLIH 668

  Fly   682 DPRSRGNSDTDSATSASSN---------SLKRKLKEMPKQTSKPPKKKVAKQVPL-----QPQLT 732
            :|.|. ::.::..|:.||.         |.:..|.|.|.:..|.|...::.|:|.     || :|
 Frog   669 NPPSL-DTVSEHLTALSSRPPAACLDFPSPRICLPEKPVEEKKKPSPPISVQLPRGASTDQP-VT 731

  Fly   733 PHPQFQLAPAATAAVSIPAISNNNNHLPHLDTLLSMPSTSAQAAALNAAAVAAASTVLDLASPSR 797
            ...:. :||:.||..|...  ......|||:                     |....|.:|.||.
 Frog   732 SEKKV-VAPSHTAKPSSDV--QQGKQKPHLN---------------------AQVKTLQIARPSM 772

  Fly   798 K--IDLNTSNNFYNLITAASLAASGNP------SPHSGDGQAKVIVGARPSPHVINLDDYQCTSD 854
            :  :.|...:|.::.:.......:|:|      .|.....:..::.|..|...:.||     |..
 Frog   773 QPSVKLYQISNQHSKVNLVHPVQNGSPRVPVLSPPQRPFTKPAIVQGYHPPSPLNNL-----TRP 832

  Fly   855 ILQTSK--QLA--ATTTVITAISKAAQTTSVARESSSESDGVEIV--------GVFPASK----- 902
            .:..|.  :||  |.||:............|...|||.|..:..:        .:..||:     
 Frog   833 AVPPSSVGKLAGNAGTTIQQVYRPPVPRNPVPPSSSSGSSSIPNLSPNSSLNPSISNASRNSSTL 897

  Fly   903 PQKKVQSKPKNKT----QNRGRSSLGAVGQVNGSL------GYSANNMYIYNSPRTLGPVYDLTD 957
            |.||....|:..|    |:.|..:.|....:..|:      |.||::...  .|....||     
 Frog   898 PTKKPPHPPQKLTLMAPQDSGVGTQGVAKLLTSSMVTGVGTGTSASSTIA--QPPKCSPV----- 955

  Fly   958 PHIMKTMSNLKEMEKQFIQAAFSPNSVKGASGGMGSSAPSTPTRQXHSGSAAQQPLPAAVTAFYN 1022
            |.|:.:..:|     ..:..|:.||..|.......|......|.. |..|.:..|:|.|..   :
 Frog   956 PTILTSTPSL-----TVLTPAYKPNGGKLPGPTQLSLLSPISTFPLHVISFSTDPVPKAAA---S 1012

  Fly  1023 QEAMAAAIVLSTMSHASPRYDLLANGSVSMSAAQVGASANTLPQVFVKPSLP---QP-SAGGDVV 1083
            ::|:.......|..|...|..|   |::..|||.   .::.||    :|||.   || ...|..:
 Frog  1013 KDAIVTGPAPGTFHHGLARNVL---GALHSSAAH---HSSQLP----RPSLANHIQPGQTDGAHI 1067

  Fly  1084 TTTGAARP 1091
            ...|.|.|
 Frog  1068 HGKGPAAP 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yemNP_001263054.1 HUN 129..178 CDD:285888 28/48 (58%)
UBN_AB 443..633 CDD:290782 57/220 (26%)
ubn1XP_031748697.1 HUN 114..165 CDD:400875 29/50 (58%)
UBN_AB 364..581 CDD:404884 60/227 (26%)
ROM1 603..>854 CDD:227709 59/281 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9296
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I4125
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002638
OrthoInspector 1 1.000 - - otm48856
Panther 1 1.100 - - O PTHR21669
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2355
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.150

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