Protein Alignment Pdhb and Bckdhb

DIOPT Version :10

• Sequence 1: NP_651668.1
• Gene: Pdhb / 43437
• FlyBaseID: FBgn0039635
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_062140.1
• Gene: Bckdhb / 29711
• RGDID: 2197
• Length: 390
• Species: Rattus norvegicus
• Alignment Length: 357
• Identity: 119/357 - (33%)
• Similarity: 182/357 - (50%)
• Gaps: 18/357 - (5%)

  Fly     7 IQAASSAQR----AFSTSQKAL---AAKQMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYK 64
            :..||..:|    .|....::|   ..::|.:..::.||||:.||:|....|.||:|| :.|.::
  Rat    40 VDDASQKRRVAHFTFQPDPESLQYGQTQKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFR 103

  Fly    65 VSRGLWKKYGDKRVIDTPITEMGFAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYM 129
            .:.||..|||..||.:||:.|.|..|..:|.|:.|...:.|....::...|.|.|:|.|||..|.
  Rat   104 CTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYR 168

  Fly   130 SAGAVNV-PIVFRGPNGAASGVAAQHSQCFAAWYAHCPGLKVLSPYDAEDARGLLKSAIRDPDPV 193
            |....|. .:..|.|.|.....|..|||...|::|||||:||:.|.....|:|||.|.|.|.:|.
  Rat   169 SGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPC 233

  Fly   194 VFLENELVYGTAFPVADNVADKDFLVPIGKAKVMRPGKDITLVAHSKAVETSLLAAAELA--KKG 256
            :|.|.:::|..|   .:.|..:.:.:|:.:|:|::.|.|:||||....|.. :...|.:|  |.|
  Rat   234 IFFEPKILYRAA---VEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHV-IREVASMAQEKLG 294

  Fly   257 IEAEVINLRSIRPLDTATIFASVRKTHHLVTVENGWPQHGVGAEICARIMEDQTFFELDAPVWRC 321
            :..|||:||:|.|.|..|:..||.||..|:.........|..:||.:.:.| :.|..|:||:.|.
  Rat   295 VSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQE-ECFLNLEAPISRV 358

  Fly   322 AGVDVPMPYAKTLEAHALPRVQDLVEATLKVL 353
            .|.|.|.|:  ..|...:|......:|..|::
  Rat   359 CGYDTPFPH--IFEPFYIPDKWKCYDALRKMI 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdhb	NP_651668.1	PLN02683	2..352	CDD:215368	118/354 (33%)
Bckdhb	NP_062140.1	PTZ00182	64..388	CDD:185502	114/331 (34%)