Protein Alignment Pdhb and Pdhb

DIOPT Version :10

• Sequence 1: NP_651668.1
• Gene: Pdhb / 43437
• FlyBaseID: FBgn0039635
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_001007621.1
• Gene: Pdhb / 289950
• RGDID: 1359146
• Length: 359
• Species: Rattus norvegicus
• Alignment Length: 353
• Identity: 243/353 - (68%)
• Similarity: 288/353 - (81%)
• Gaps: 2/353 - (0%)

  Fly     1 MLRTRLIQAASSAQRAFSTSQKALAAKQMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKV 65
            ::|..|.||:...:|.|..|  |.||.|:|||:|:|..:|:||.||::||:||||||||||||||
  Rat     7 LVRGPLRQASGLLKRRFHRS--APAAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKV 69

  Fly    66 SRGLWKKYGDKRVIDTPITEMGFAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYMS 130
            ||||||||||||:|||||:||||||||||||||||||:|||||:||||||||.:|||||||:|||
  Rat    70 SRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMS 134

  Fly   131 AGAVNVPIVFRGPNGAASGVAAQHSQCFAAWYAHCPGLKVLSPYDAEDARGLLKSAIRDPDPVVF 195
            ||...|||||||||||::||||||||||||||.|||||||:||:::|||:||:||||||.:|||.
  Rat   135 AGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVM 199

  Fly   196 LENELVYGTAFPVADNVADKDFLVPIGKAKVMRPGKDITLVAHSKAVETSLLAAAELAKKGIEAE 260
            |||||:||.||.:......||||:||||||:.|.|..||:||||:.|...|.|||.|:|:|||.|
  Rat   200 LENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECE 264

  Fly   261 VINLRSIRPLDTATIFASVRKTHHLVTVENGWPQHGVGAEICARIMEDQTFFELDAPVWRCAGVD 325
            |||||:|||:|...|.|||.||:||||||.||||.||||||||||||...|..||||..|..|.|
  Rat   265 VINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGAD 329

  Fly   326 VPMPYAKTLEAHALPRVQDLVEATLKVL 353
            |||||||.||.:::|:|:|::.|..|.|
  Rat   330 VPMPYAKILEDNSIPQVKDIIFAIKKTL 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdhb	NP_651668.1	PLN02683	2..352	CDD:215368	241/349 (69%)
Pdhb	NP_001007621.1	PRK11892	<31..355	CDD:237011	232/323 (72%)