DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ib and MNS3

DIOPT Version :9

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001320239.1 Gene:MNS3 / 839879 AraportID:AT1G30000 Length:644 Species:Arabidopsis thaliana


Alignment Length:542 Identity:237/542 - (43%)
Similarity:310/542 - (57%) Gaps:71/542 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 LTLGGVSFKEHLKKIKPILA------KGQHFHGAT--------NERQSAVVAAFKHSWAGYKKYA 254
            |.|||:..|.  .::.|.|:      :|...:|:|        ..||.:|..||.|:|:||:|||
plant   105 LRLGGLLRKP--PRLPPRLSPDEGQLRGSSTNGSTISNSDPKWAARQQSVKEAFDHAWSGYRKYA 167

  Fly   255 WGHDNLKPISQYSHEWF-GLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSL--RFDTKRDVNLFE 316
            .|:|.|.||||...:.. |||.|:||:|||..|||||:...|...|||..|  |...|..|||||
plant   168 MGYDELMPISQKGVDGLGGLGATVVDALDTAMIMGLDNIVSEAGSWVETHLLERISQKGQVNLFE 232

  Fly   317 VTIRVLGGLLSAYHLSG--------------DTMFLAKAAELGNRLLPAF-QSPSNIPYSDVNLG 366
            .||||||||||||||||              ..::|..|.:|.:|||.|| .||:.:|:.||.|.
plant   233 TTIRVLGGLLSAYHLSGGEQGTVNMTHVGPKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILH 297

  Fly   367 DLSAHSPKWSPDSSTSEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHGLVPIFINAN 431
            :.:|| |.....|||:||.::||||..||..:....|...|.||...:..|.|..|||||:|:..
plant   298 ESTAH-PAPGGASSTAEVASVQLEFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLVPIYISPQ 361

  Fly   432 TGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNL--ILD-YMQAVDGVLTQLMRRTPREHW 493
            ||.|.. ..|.||:|||||||||:|.|:|.|.|.|.|.  :.| |::|:.||...|::.:..:..
plant   362 TGDFVG-ENIRLGSRGDSYYEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRHLLVQNSIPKGL 425

  Fly   494 VYIGELINGK--DFKPKMDHLTCYLPGTLILGHQNGMPD--------------SHLILARDLLDT 542
            |::|||..|.  :|.||||||.|:|||||.||...|:..              .:|.||.||..|
plant   426 VFVGELPYGSKGEFSPKMDHLVCFLPGTLALGATKGLTKEQALKENLLSFEDLENLKLAEDLAKT 490

  Fly   543 CYQTYMMNPTHLAAEISYFALTEKDD-------------QDIYVKPNDAHNLLRPEFVESLYYFY 594
            |::.|.:..|.||.||:||...:..:             .||.:||.|.|||||||.||||:..|
plant   491 CFEMYEVTATGLAPEIAYFHTKDYTEDGLDGGNKSSMYANDIIIKPADRHNLLRPETVESLFVLY 555

  Fly   595 SITGNRTYQDMGWKIFQAFETHAKV-NAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFS 658
            .||.:..|:|.||:||:|||.:.|| :.||||:.:|......| ||.||:|::.|||||.||||.
plant   556 RITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVTEVPPHR-RDKMETFFLGETLKYLYLLFG 619

  Fly   659 DDRKEIDLEQWVFNSEGHPLPV 680
            || ..|.|:::|||:|.||||:
plant   620 DD-SVIPLDKFVFNTEAHPLPI 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 223/488 (46%)
MNS3NP_001320239.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 361 1.000 Domainoid score I194
eggNOG 1 0.900 - - E1_KOG2431
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5230
Inparanoid 1 1.050 366 1.000 Inparanoid score I574
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D693882at2759
OrthoFinder 1 1.000 - - FOG0002927
OrthoInspector 1 1.000 - - oto4254
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - LDO PTHR11742
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2293
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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