DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ib and edem1

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_957483.2 Gene:edem1 / 394164 ZFINID:ZDB-GENE-040426-808 Length:628 Species:Danio rerio


Alignment Length:523 Identity:153/523 - (29%)
Similarity:229/523 - (43%) Gaps:109/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SFKEHLKKIKPILAKGQHFHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPIS---------- 264
            ||.:.||.....:|:...:.|..|                |.|:|:..|.|.||:          
Zfish   106 SFPDALKVKMRAMARDMFYFGYDN----------------YMKFAFPEDELNPIACEGRGPDVLN 154

  Fly   265 -----------QYSHEWFGLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVT 318
                       .||       ||::|:|||:.::|...||......|..::.||....|.:||..
Zfish   155 PSNININDVLGNYS-------LTLIDTLDTLLVLGNVTEFHRAVKLVIDTVSFDKDSTVQVFEAN 212

  Fly   319 IRVLGGLLSAY-------HLSG-------DTMFLAKAAELGNRLLPAFQSPS-NIPYSDVNLGDL 368
            ||:||.|:||:       |..|       |...|..|.:|..||||||::.| .|||..|||   
Zfish   213 IRILGSLISAHILLTDPRHPFGDVGLKDYDNELLHLAHDLAVRLLPAFENTSTGIPYPRVNL--- 274

  Fly   369 SAHSPKWSPDSSTSEVTT-----IQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNH-GLVPIF 427
                ....|..|.:|..|     :.:||..|||....|.:|.||.:..:.:..|..|. ||:...
Zfish   275 ----KNGVPPDSINETCTAGAGSLLVEFGILSRLIGDSTFEWVARRAVKALWKLRSNETGLLGNV 335

  Fly   428 INANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREH 492
            :|..||.:....: .|||..||:||||||.:|..|.|::..:   :..|.:.:.:.|  |..||.
Zfish   336 VNIQTGQWVGKQS-GLGAGMDSFYEYLLKSYILFGEKEDFRM---FTAAYESIQSHL--RRGREA 394

  Fly   493 W--------VYIG-ELINGKDFKPKMDHLTCYLPGTLILGHQNGMPDSHLILARDLLDTCYQTYM 548
            .        :|:. .:.||:.....:|.|..:.||..:|   ||..::.:         |...: 
Zfish   395 CNEGEGDPPLYVNVNMFNGQIMNTWIDSLQAFFPGLQVL---NGDVENAI---------CLHAF- 446

  Fly   549 MNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAF 613
                :.|....:.||.|:.:..:.. |:.....||||.|||.|..|..|.|..|..:|..|.::.
Zfish   447 ----YYAIWKRFGALPERYNWQLQA-PDVLFYPLRPELVESTYLLYQATKNPFYLHVGMDILESL 506

  Fly   614 ETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEIDLE-QWVFNSEGHP 677
            |.:.||..||.::.:|.:...   .|.||||::|||.||.||||.:|......| :::|.:|||.
Zfish   507 EKNTKVRCGYATLHHVVDKSK---EDRMESFFLSETCKYLYLLFDEDNPLHKSENKYIFTTEGHV 568

  Fly   678 LPV 680
            :|:
Zfish   569 VPI 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 145/489 (30%)
edem1NP_957483.2 Glyco_hydro_47 122..571 CDD:460241 147/505 (29%)

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