DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ib and Man1a1

DIOPT Version :9

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_006256559.1 Gene:Man1a1 / 294410 RGDID:1310891 Length:746 Species:Rattus norvegicus


Alignment Length:717 Identity:217/717 - (30%)
Similarity:350/717 - (48%) Gaps:112/717 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKDGGHITLTLPPGSAATTD------ERGRKSLRRAWNQLPRCQRNLIILGITGFCVTVLLCLSG 59
            |..||.:.|...||......      ..|||....|..:|  .::.:::|..:.|   :.||...
  Rat    92 MPVGGLLPLFSSPGGGGLGGGLGGGLGGGRKGSGPAAFRL--TEKFVLLLVFSAF---ITLCFGA 151

  Fly    60 DQLLAASLKDVDTKAEVAAYQMPL--PNPHHHPGV---------------DKDVPKDTAAVPVPA 107
            ...|..|.|   ..:.|..:..|.  |...|.||:               ::.||.|..|   ..
  Rat   152 IFFLPDSSK---LLSGVLFHSNPALQPPAEHKPGLGARAEDAAEGRVRHREEGVPGDPGA---GL 210

  Fly   108 DKRAPRVEAVSDKFNELVAYGEANSAENVARLPETVAAEGLPQASAMAVALPPPDSNKEQDIGG- 171
            :....|:     :.|...|..||.  |.:.:|||.:..:.|.:...:|     .|..:::|:.| 
  Rat   211 EDNLARI-----RENHERALREAK--ETLQKLPEEIQRDILLEKEKVA-----QDQLRDKDLFGG 263

  Fly   172 ---IDILNNVEEPVAQDPAEPLSEGEQLEQAIKNPLTLGGVSFKEHLKKIKPILAKGQHFHGATN 233
               :|.|    .|:..:..||                 ...:.:|...|||.::|          
  Rat   264 LPKVDFL----PPIGVENREP-----------------ADATIREKRSKIKEMMA---------- 297

  Fly   234 ERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSH--EWFG--LGLTIVDSLDTMYIMGLDDEFK 294
                       |:|..||:||||.:.|||||:..|  ..||  .|.||||:|||::|||:..||:
  Rat   298 -----------HAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKTEFQ 351

  Fly   295 EGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAELGNRLLPAFQSPSNIP 359
            |.:.|:::.|.|:...:|::|||.||.:|||||||:|||:.:|..||.|||.:|||||.|||.||
  Rat   352 EAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHSPSGIP 416

  Fly   360 YSDVNLGDLSAHSPKWSPDSST--SEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHG 422
            ::.:|:......:..|:...|:  :|..|:.|||..|:..:...::.:....:...::.|:|..|
  Rat   417 WALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLAHLSGNPVFAEKVMNIRTVLNKLDKPEG 481

  Fly   423 LVPIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRR 487
            |.|.::|.::|.:..: .:|:|..|||:||||||.|:.:.:.|.:...: |..||..:.|.|:|:
  Rat   482 LYPNYLNPSSGQWGQH-HVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKM-YFDAVQAIETHLIRK 544

  Fly   488 TPREHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQNGMPDS----HLILARDLLDTCYQTYM 548
            : .....||.|...|. .:.||.||||:..|...|| .:|.|::    :|.|..::..||:::|.
  Rat   545 S-SGGLTYIAEWKGGL-LEHKMGHLTCFAGGMFALG-ADGAPEARAQHYLELGAEIARTCHESYN 606

  Fly   549 MNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAF 613
            .....|..|...|   :...:.|..:.|:.:.:||||.:|:..|.:.:|.:..|:...|:..:|.
  Rat   607 RTYVKLGPEAFRF---DGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEAL 668

  Fly   614 ETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEIDLEQWVFNSEGHPL 678
            |:|.:||.||:.:.:|.....: ..|:.:||:::|||||.||:|||| ..:.||.|:||:|.||.
  Rat   669 ESHCRVNGGYSGLRDVYIAHES-YDDVQQSFFLAETLKYLYLIFSDD-DLLPLEHWIFNTEAHPF 731

  Fly   679 PV 680
            |:
  Rat   732 PI 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 164/447 (37%)
Man1a1XP_006256559.1 Glyco_hydro_47 295..733 CDD:279825 165/468 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.