DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ib and F10C2.5

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_506018.1 Gene:F10C2.5 / 179653 WormBaseID:WBGene00008646 Length:781 Species:Caenorhabditis elegans


Alignment Length:484 Identity:142/484 - (29%)
Similarity:219/484 - (45%) Gaps:91/484 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 FKHSWAGYKKYAWGHDNLKPISQYSHE-WFGLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSLRF 306
            |.|::.||..:|:..|.||||:....: |....|:::|:|||:.:||...||:.....|.:..|.
 Worm    50 FYHAYNGYLDHAFPLDELKPITCVGQDTWGSFSLSLIDALDTLLVMGNTTEFRRAVSLVLEKARD 114

  Fly   307 DTKRDVNLFEVTIRVLGGLLSAYHLSG--------------DTMFLAKAAELGNRLLPAFQSPSN 357
            |...:|::||..|||:|||:||:.|:|              |:..|..|.::.:||:|||.:.:.
 Worm   115 DANVNVSVFETNIRVVGGLISAHMLAGRHKDLVVDWEGYPCDSPLLKLAVKMADRLMPAFNTETG 179

  Fly   358 IPYSDVNLGDLSAHSPKWSPDSSTSEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHG 422
            :||..||| ....|..: :|.:.|:.|.|..:||..|||.|....||:||.|..:.:.......|
 Worm   180 MPYGTVNL-KYGVHKDE-TPITCTAGVGTFLIEFGTLSRLTGDDKYEKVALKALDALWSTRSPIG 242

  Fly   423 LVPIFINANTGTFRNYATIS-LGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMR 486
            ||...||..||.:.  ||.| :||..|||:|||.|......|.       ..|:......|.:.:
 Worm   243 LVGNHINVQTGQWT--ATDSGIGAGVDSYFEYLAKGAYLFRRP-------SLMKQFHEHATSINK 298

  Fly   487 RTPREHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQNGMPDSHLILARDLLDTCYQTYMMNP 551
            ...:..|.....:..|....|....|..:.||||.:  ...:.|:..|:                
 Worm   299 HVRKGEWFMWVSMAKGSVSLPIFQSLEAFWPGTLTM--VGDVQDASRIM---------------- 345

  Fly   552 THLAAEISYFALTEKDDQDIYVKPNDAHNL-------------LRPEFVESLYYFYSITGNRTYQ 603
                  ::|..:..|     |..|.:.:|:             ||||.||||.|.|..|.:.|:.
 Worm   346 ------LTYSEVIRK-----YGFPPEFYNIHNEEPGEKRAAFPLRPEMVESLMYLYRATKDETWL 399

  Fly   604 DMGWKIFQAFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLF---------SD 659
            ::|.::..|.|:.|:...||.::.|||...   :.|.||||:::||.||.||||         .|
 Worm   400 ELGAEMIDAIESSARTKCGYATINNVKEHS---IEDRMESFFLAETTKYLYLLFDPTNFIHSKGD 461

  Fly   660 DRKEIDLEQ----------WVFNSEGHPL 678
            ..:.:...:          ::||:|.||:
 Worm   462 QARILTSPKNLTCVIYGGGYIFNTEAHPV 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 142/484 (29%)
F10C2.5NP_506018.1 Glyco_hydro_47 49..489 CDD:460241 140/481 (29%)
PTZ00121 <501..642 CDD:173412
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.